An overview of the use of genotyping techniques for assessing genetic diversity in local farm animal breeds

A Olschewsky, D Hinrichs - Animals, 2021 - mdpi.com
Simple Summary The number of local farm animal breeds is declining worldwide. However,
these breeds have different degrees of genetic diversity. Measuring genetic diversity is …

Genome-wide scan for runs of homozygosity identifies potential candidate genes associated with local adaptation in Valle del Belice sheep

S Mastrangelo, M Tolone, MT Sardina, G Sottile… - Genetics Selection …, 2017 - Springer
Background Because very large numbers of single nucleotide polymorphisms (SNPs) are
now available throughout the genome, they are particularly suitable for the detection of …

On the origin of European sheep as revealed by the diversity of the Balkan breeds and by optimizing population-genetic analysis tools

E Ciani, S Mastrangelo, A Da Silva, F Marroni… - Genetics Selection …, 2020 - Springer
Abstract Background In the Neolithic, domestic sheep migrated into Europe and
subsequently spread in westerly and northwesterly directions. Reconstruction of these …

Genome-wide estimates of genetic diversity, inbreeding and effective size of experimental and commercial rainbow trout lines undergoing selective breeding

J D'ambrosio, F Phocas, P Haffray, A Bestin… - Genetics Selection …, 2019 - Springer
Background Selective breeding is a relatively recent practice in aquaculture species
compared to terrestrial livestock. Nevertheless, the genetic variability of farmed salmonid …

Runs of homozygosity reveal genome‐wide autozygosity in Italian sheep breeds

S Mastrangelo, E Ciani, MT Sardina, G Sottile… - Animal …, 2018 - Wiley Online Library
The availability of dense single nucleotide polymorphism (SNP) assays allows for the
determination of autozygous segments based on runs of consecutive homozygous …

Conservation status and historical relatedness of Italian cattle breeds

S Mastrangelo, E Ciani, P Ajmone Marsan… - Genetics Selection …, 2018 - Springer
Background In the last 50 years, the diversity of cattle breeds has experienced a severe
contraction. However, in spite of the growing diffusion of cosmopolite specialized breeds …

Genomic measures of inbreeding coefficients and genome-wide scan for runs of homozygosity islands in Iranian river buffalo, Bubalus bubalis

SM Ghoreishifar, H Moradi-Shahrbabak, MH Fallahi… - BMC genetics, 2020 - Springer
Background Consecutive homozygous fragments of a genome inherited by offspring from a
common ancestor are known as runs of homozygosity (ROH). ROH can be used to calculate …

Detection and visualization of heterozygosity-rich regions and runs of homozygosity in worldwide sheep populations

A Selli, RV Ventura, PAS Fonseca, ME Buzanskas… - Animals, 2021 - mdpi.com
Simple Summary Heterozygosity-rich regions (HRRs) are regions of high heterozygosity,
which can harbor important genes associated with key functional traits such as immune …

[HTML][HTML] Inbreeding and effective population size in French dairy sheep: Comparison between genomic and pedigree estimates

ST Rodríguez-Ramilo, JM Elsen, A Legarra - Journal of Dairy Science, 2019 - Elsevier
Before availability of dense SNP data, genetic diversity was characterized and managed
with pedigree-based information. Besides this classical approach, 2 methodologies have …

The role of molecular genetics in livestock production

GMF de Camargo - Animal Production Science, 2018 - CSIRO Publishing
Genetic variations that lead to easy-to-identify phenotypic changes have always been of
interest to livestock breeders since domestication. Molecular genetics has opened up …