The 2022 Nucleic Acids Research database issue and the online molecular biology database collection

DJ Rigden, XM Fernández - Nucleic acids research, 2022 - academic.oup.com
Abstract The 2022 Nucleic Acids Research Database Issue contains 185 papers, including
87 papers reporting on new databases and 85 updates from resources previously published …

Overriding Mendelian inheritance in Arabidopsis with a CRISPR toxin–antidote gene drive that impairs pollen germination

Y Liu, B Jiao, J Champer, W Qian - Nature Plants, 2024 - nature.com
Synthetic gene drives, inspired by natural selfish genetic elements and transmitted to
progeny at super-Mendelian (> 50%) frequencies, present transformative potential for …

TFAM is an autophagy receptor that limits inflammation by binding to cytoplasmic mitochondrial DNA

H Liu, C Zhen, J Xie, Z Luo, L Zeng, G Zhao, S Lu… - Nature Cell …, 2024 - nature.com
When cells are stressed, DNA from energy-producing mitochondria can leak out and drive
inflammatory immune responses if not cleared. Cells employ a quality control system called …

Comparative transcriptomics revealed neurodevelopmental impairments and ferroptosis induced by extremely small iron oxide nanoparticles

Z Lyu, Y Kou, Y Fu, Y Xie, B Yang, H Zhu… - Frontiers in Genetics, 2024 - frontiersin.org
Iron oxide nanoparticles are a type of nanomaterial composed of iron oxide (Fe3O4 or
Fe2O3) and have a wide range of applications in magnetic resonance imaging. Compared …

[HTML][HTML] Time-course swRNA-seq uncovers a hierarchical gene regulatory network in controlling the response-repair-remodeling after wounding

X Yu, J Zhou, W Ye, J Xu, R Li, L Huang, Y Chai… - Communications …, 2024 - nature.com
Wounding initiates intricate responses crucial for tissue repair and regeneration. Yet, the
gene regulatory networks governing wound healing remain poorly understood. Here …

Multiplex assays reveal anti‐EBV antibody profile and its implication in detection and diagnosis of nasopharyngeal carcinoma

L Ma, TM Wang, YQ He, Y Liao, X Yan… - … Journal of Cancer, 2024 - Wiley Online Library
Epstein–Barr virus (EBV) is detected in nearly 100% of nonkeratinizing nasopharyngeal
carcinoma (NPC) and EBV‐based biomarkers are used for NPC screening in endemic …

[HTML][HTML] Comparative Genome-Wide Association Study on Body Weight in Chinese Native Ducks Using Four Models

Y Zhang, C Jia, S Li, S Wang, Z He, G Wu, M Yu, Y Lu… - Poultry Science, 2024 - Elsevier
ABSTRACT The Jinling White duck represents a newly developed breed characterized by a
rapid growth rate and a superior meat quality, offering significant economic value and …

[HTML][HTML] Discovery of novel RNA viruses through analysis of fungi-associated next-generation sequencing data

X Lu, Z Dai, J Xue, W Li, P Ni, J Xu, C Zhou, W Zhang - BMC genomics, 2024 - Springer
Background Like all other species, fungi are susceptible to infection by viruses. The diversity
of fungal viruses has been rapidly expanding in recent years due to the availability of …

[HTML][HTML] The chromosome-level genome and functional database accelerate research about biosynthesis of secondary metabolites in Rosa roxburghii

J Yang, J Zhang, H Yan, X Yi, Q Pan, Y Liu, M Zhang… - BMC Plant …, 2024 - Springer
Rosa roxburghii Tratt, a valuable plant in China with long history, is famous for its fruit. It
possesses various secondary metabolites, such as L-ascorbic acid (vitamin C), alkaloids …

Comparative genomic sequencing to characterize Mycoplasma pneumoniae genome, typing, and drug resistance

Y Jiang, H Kang, H Dou, D Guo, Q Yuan… - Microbiology …, 2024 - journals.asm.org
To analyze the characteristics of Mycoplasma pneumoniae as well as macrolide antibiotic
resistance through whole-genome sequencing and comparative genomics. Thirteen clinical …