Engineered CRISPR-Cas systems for the detection and control of antibiotic-resistant infections

Y Wu, D Battalapalli, MJ Hakeem, V Selamneni… - Journal of …, 2021 - Springer
Antibiotic resistance is spreading rapidly around the world and seriously impeding efforts to
control microbial infections. Although nucleic acid testing is widely deployed for the …

Nanofluidics: a new arena for materials science

Y Xu - Advanced Materials, 2018 - Wiley Online Library
A significant growth of research in nanofluidics is achieved over the past decade, but the
field is still facing considerable challenges toward the transition from the current physics …

DNA in nanochannels: theory and applications

K Frykholm, V Müller, KK Sriram… - Quarterly Reviews of …, 2022 - cambridge.org
Nanofluidic structures have over the last two decades emerged as a powerful platform for
detailed analysis of DNA on the kilobase pair length scale. When DNA is confined to a …

Optical DNA mapping in nanofluidic devices: principles and applications

V Müller, F Westerlund - Lab on a Chip, 2017 - pubs.rsc.org
Optical DNA mapping has over the last decade emerged as a very powerful tool for
obtaining long range sequence information from single DNA molecules. In optical DNA …

Single-molecule optical genome mapping in nanochannels: multidisciplinarity at the nanoscale

J Jeffet, S Margalit, Y Michaeli… - Essays in …, 2021 - portlandpress.com
The human genome contains multiple layers of information that extend beyond the genetic
sequence. In fact, identical genetics do not necessarily yield identical phenotypes as evident …

Beyond sequencing: optical mapping of DNA in the age of nanotechnology and nanoscopy

M Levy-Sakin, Y Ebenstein - Current opinion in biotechnology, 2013 - Elsevier
Next generation sequencing (NGS) is revolutionizing all fields of biological research but it
fails to extract the full range of information associated with genetic material. Optical mapping …

Characterization of ESBL disseminating plasmids

A Brolund, L Sandegren - Infectious diseases, 2016 - Taylor & Francis
Bacteria producing extended-spectrum β-lactamases (ESBLs) constitute a globally
increasing problem that contributes to treatment complications and elevated death rates …

Molecular Epidemiology of OXA-48 and NDM-1 Producing Enterobacterales Species at a University Hospital in Tehran, Iran, Between 2015 and 2016

H Solgi, S Nematzadeh, CG Giske, F Badmasti… - Frontiers in …, 2020 - frontiersin.org
Carbapenem-resistant Enterobacterales (CRE) is an increasing problem worldwide. Here,
we examined the clonal relatedness of 71 non-repetitive CRE isolates collected in a …

Direct identification of antibiotic resistance genes on single plasmid molecules using CRISPR/Cas9 in combination with optical DNA mapping

V Müller, F Rajer, K Frykholm, LK Nyberg, S Quaderi… - Scientific reports, 2016 - nature.com
Bacterial plasmids are extensively involved in the rapid global spread of antibiotic
resistance. We here present an assay, based on optical DNA mapping of single plasmids in …

Lipid-based passivation in nanofluidics

F Persson, J Fritzsche, KU Mir, M Modesti… - Nano …, 2012 - ACS Publications
Stretching DNA in nanochannels is a useful tool for direct, visual studies of genomic DNA at
the single molecule level. To facilitate the study of the interaction of linear DNA with proteins …