[HTML][HTML] FoldX as protein engineering tool: better than random based approaches?

O Buß, J Rudat, K Ochsenreither - Computational and structural …, 2018 - Elsevier
Improving protein stability is an important goal for basic research as well as for clinical and
industrial applications but no commonly accepted and widely used strategy for efficient …

PremPS: Predicting the impact of missense mutations on protein stability

Y Chen, H Lu, N Zhang, Z Zhu, S Wang… - PLoS computational …, 2020 - journals.plos.org
Computational methods that predict protein stability changes induced by missense
mutations have made a lot of progress over the past decades. Most of the available methods …

A review on cyclin-dependent kinase 5: An emerging drug target for neurodegenerative diseases

S Batra, S Jahan, A Ashraf, B Alharby, T Jawaid… - International Journal of …, 2023 - Elsevier
Abstract Cyclin-dependent kinase 5 (CDK5) is the serine/threonine-directed kinase mainly
found in the brain and plays a significant role in developing the central nervous system …

Comprehensive in silico analysis and molecular dynamics of the superoxide dismutase 1 (SOD1) variants related to amyotrophic lateral sclerosis

GRC Pereira, BAA Vieira, JF De Mesquita - PLoS One, 2021 - journals.plos.org
Amyotrophic Lateral Sclerosis (ALS) is the most frequent motor neuron disorder, with a
significant social and economic burden. ALS remains incurable, and the only drugs …

Targeted protein degraders march towards the clinic for neurodegenerative diseases

D Kumar, MI Hassan - Ageing Research Reviews, 2022 - Elsevier
Protein degraders are emerging as potent therapeutic tools to address neurological
disorders and many complex diseases. It offered several key advantages, including the …

Combining structural aggregation propensity and stability predictions to redesign protein solubility

M Gil-Garcia, M Bano-Polo, N Varejao… - Molecular …, 2018 - ACS Publications
The aggregation propensity of each particular protein seems to be shaped by evolution
according to its natural abundance in the cell. The production and downstream processing …

Identifying the molecular drivers of ALS-implicated missense mutations

S Portelli, A Albanaz, DEV Pires… - Journal of Medical …, 2023 - jmg.bmj.com
Background Amyotrophic lateral sclerosis (ALS) is a progressively fatal, neurodegenerative
disease associated with both motor and non-motor symptoms, including frontotemporal …

Impact of amino acid substitution in the kinase domain of Bruton tyrosine kinase and its association with X-linked agammaglobulinemia

T Mohammad, M Amir, K Prasad, S Batra… - International journal of …, 2020 - Elsevier
X-linked agammaglobulinemia (XLA) is a rare disease that affects the immune system,
characterized by a serial development of bacterial infection from the onset of infantile age …

Insights into the conserved regulatory mechanisms of human and yeast aging

R Dahiya, T Mohammad, MF Alajmi, MT Rehman… - Biomolecules, 2020 - mdpi.com
Aging represents a significant biological process having strong associations with cancer,
diabetes, and neurodegenerative and cardiovascular disorders, which leads to progressive …

Expedition into taurine biology: structural insights and therapeutic perspective of taurine in neurodegenerative diseases

MA Bhat, K Ahmad, MSA Khan, MA Bhat, A Almatroudi… - Biomolecules, 2020 - mdpi.com
Neurodegenerative diseases (NDs) are characterized by the accumulation of misfolded
proteins. The hallmarks of protein aggregation in NDs proceed with impairment in the …