Biophysical characterisation of human LincRNA-p21 sense and antisense Alu inverted repeats

MH D'Souza, T Mrozowich, MD Badmalia… - Nucleic acids …, 2022 - academic.oup.com
Abstract Human Long Intergenic Noncoding RNA-p21 (LincRNA-p21) is a regulatory
noncoding RNA that plays an important role in promoting apoptosis. LincRNA-p21 is also …

Human DDX17 unwinds rift valley fever virus non-coding RNAs

CR Nelson, T Mrozowich, SM Park, S D'souza… - International journal of …, 2020 - mdpi.com
Rift Valley fever virus (RVFV) is a mosquito-transmitted virus from the Bunyaviridae family
that causes high rates of mortality and morbidity in humans and ruminant animals. Previous …

New perspective of small-molecule antiviral drugs development for RNA viruses

S Li, H Li, R Lian, J Xie, R Feng - Virology, 2024 - Elsevier
High variability and adaptability of RNA viruses allows them to spread between humans and
animals, causing large-scale infectious diseases which seriously threat human and animal …

Molecular characterization of the RNA-protein complex directing− 2/− 1 programmed ribosomal frameshifting during arterivirus replicase expression

A Patel, EE Treffers, M Meier, TR Patel… - Journal of Biological …, 2020 - ASBMB
Programmed ribosomal frameshifting (PRF) is a mechanism used by arteriviruses like
porcine reproductive and respiratory syndrome virus (PRRSV) to generate multiple proteins …

Evaluating RNA structural flexibility: Viruses lead the way

CW Fairman, AML Lever, JC Kenyon - Viruses, 2021 - mdpi.com
Our understanding of RNA structure has lagged behind that of proteins and most other
biological polymers, largely because of its ability to adopt multiple, and often very different …

Purification and characterization of inorganic pyrophosphatase for in vitro RNA transcription

S Tersteeg, T Mrozowich, A Henrickson… - … and Cell Biology, 2022 - cdnsciencepub.com
Inorganic pyrophosphatase (iPPase) is an enzyme that cleaves pyrophosphate into two
phosphate molecules. This enzyme is an essential component of in vitro transcription (IVT) …

An African tick flavivirus forming an independent clade exhibits unique exoribonuclease-resistant RNA structures in the genomic 3′-untranslated region

H Harima, Y Orba, S Torii, Y Qiu, M Kajihara, Y Eto… - Scientific reports, 2021 - nature.com
Tick-borne flaviviruses (TBFVs) infect mammalian hosts through tick bites and can cause
various serious illnesses, such as encephalitis and hemorrhagic fevers, both in humans and …

Analytical ultracentrifuge: an ideal tool for characterization of non-coding RNAs

MD Badmalia, MQ Siddiqui, T Mrozowich… - European Biophysics …, 2020 - Springer
Analytical ultracentrifugation (AUC) has emerged as a robust and reliable technique for
biomolecular characterization with extraordinary sensitivity. AUC is widely used to study …

Investigating RNA–RNA interactions through computational and biophysical analysis

T Mrozowich, SM Park, M Waldl… - Nucleic acids …, 2023 - academic.oup.com
Numerous viruses utilize essential long-range RNA–RNA genome interactions, specifically
flaviviruses. Using Japanese encephalitis virus (JEV) as a model system, we …

Biochemically investigating the roles of papain-like proteases from+ ssRNA viruses in replication and innate immune suppression

A Patel - 2021 - mspace.lib.umanitoba.ca
Positive-sense single-stranded RNA (+ ssRNA) viruses are diverse in the way their
genomes are packaged, polyproteins are arranged, and the hosts they infect. They often …