Comprehensive investigation of pathway enrichment methods for functional interpretation of LC–MS global metabolomics data

Y Lu, Z Pang, J Xia - Briefings in Bioinformatics, 2023 - academic.oup.com
Background: Global or untargeted metabolomics is widely used to comprehensively
investigate metabolic profiles under various pathophysiological conditions such as …

Hyperinflammatory immune response and COVID-19: a double edged sword

LY Tan, TV Komarasamy… - Frontiers in …, 2021 - frontiersin.org
The coronavirus disease-19 (COVID-19) elicited by the severe acute respiratory syndrome
coronavirus 2 (SARS-CoV-2) has caused devastating health, economic and social impact …

Alzheimer's‐like signaling in brains of COVID‐19 patients

S Reiken, L Sittenfeld, H Dridi, Y Liu… - Alzheimer's & …, 2022 - Wiley Online Library
Introduction The mechanisms that lead to cognitive impairment associated with COVID‐19
are not well understood. Methods Brain lysates from control and COVID‐19 patients were …

[HTML][HTML] Markers of fungal translocation are elevated during post-acute sequelae of SARS-CoV-2 and induce NF-κB signaling

LB Giron, MJ Peluso, J Ding, G Kenny, NF Zilberstein… - JCI insight, 2022 - ncbi.nlm.nih.gov
Long COVID, a type of post-acute sequelae of SARS-CoV-2 (PASC), has been associated
with sustained elevated levels of immune activation and inflammation. However, the …

Tumor microenvironment activated photoacoustic-fluorescence bimodal nanoprobe for precise chemo-immunotherapy and immune response tracing of glioblastoma

F Zeng, Z Fan, S Li, L Li, T Sun, Y Qiu, L Nie… - ACS nano, 2023 - ACS Publications
Synergistic therapy strategy and prognostic monitoring of glioblastoma's immune response
to treatment are crucial to optimize patient care and advance clinical outcomes. However …

Untargeted metabolomics of COVID-19 patient serum reveals potential prognostic markers of both severity and outcome

I Roberts, M Wright Muelas, JM Taylor, AS Davison… - Metabolomics, 2022 - Springer
Introduction The diagnosis of COVID-19 is normally based on the qualitative detection of
viral nucleic acid sequences. Properties of the host response are not measured but are key …

The tryptophan catabolite or kynurenine pathway in COVID-19 and critical COVID-19: a systematic review and meta-analysis

AF Almulla, T Supasitthumrong… - BMC Infectious …, 2022 - Springer
Abstract Background Coronavirus disease 2019 (COVID-19) is accompanied by activated
immune-inflammatory pathways and oxidative stress, which both induce indoleamine-2, 3 …

Neutrophil metabolomics in severe COVID-19 reveal GAPDH as a suppressor of neutrophil extracellular trap formation

Y Li, JS Hook, Q Ding, X Xiao, SS Chung… - Nature …, 2023 - nature.com
Severe COVID-19 is characterized by an increase in the number and changes in the
function of innate immune cells including neutrophils. However, it is not known how the …

Urine metabolomics links dysregulation of the tryptophan-kynurenine pathway to inflammation and severity of COVID-19

JP Dewulf, M Martin, S Marie, F Oguz, L Belkhir… - Scientific reports, 2022 - nature.com
SARS-CoV-2 causes major disturbances in serum metabolite levels, associated with
severity of the immune response. Despite the numerous advantages of urine for biomarker …

COVID-19 as a syndemic

E Courtin, P Vineis - Frontiers in public health, 2021 - frontiersin.org
There are several reasons why the paper by Logette et al.(1) on the complex metabolic
pathways underlying the clinical course of COVID-19 is innovative and important. They …