Drug discovery with explainable artificial intelligence

J Jiménez-Luna, F Grisoni, G Schneider - Nature Machine Intelligence, 2020 - nature.com
Deep learning bears promise for drug discovery, including advanced image analysis,
prediction of molecular structure and function, and automated generation of innovative …

Toxicity prediction based on artificial intelligence: A multidisciplinary overview

E Perez Santin, R Rodríguez Solana… - Wiley …, 2021 - Wiley Online Library
The use and production of chemical compounds are subjected to strong legislative pressure.
Chemical toxicity and adverse effects derived from exposure to chemicals are key regulatory …

Therapeutic target database update 2022: facilitating drug discovery with enriched comparative data of targeted agents

Y Zhou, Y Zhang, X Lian, F Li, C Wang… - Nucleic acids …, 2022 - academic.oup.com
Drug discovery relies on the knowledge of not only drugs and targets, but also the
comparative agents and targets. These include poor binders and non-binders for developing …

Coloring molecules with explainable artificial intelligence for preclinical relevance assessment

J Jiménez-Luna, M Skalic, N Weskamp… - Journal of Chemical …, 2021 - ACS Publications
Graph neural networks are able to solve certain drug discovery tasks such as molecular
property prediction and de novo molecule generation. However, these models are …

[HTML][HTML] Next generation radiotheranostics promoting precision medicine

KL Pomykala, BA Hadaschik, O Sartor, S Gillessen… - Annals of …, 2023 - Elsevier
Radiotheranostics is a field of rapid growth with some approved treatments including 131 I
for thyroid cancer, 223 Ra for osseous metastases, 177 Lu-Dotatate for neuroendocrine …

Machine learning in drug discovery

G Klambauer, S Hochreiter… - Journal of chemical …, 2019 - ACS Publications
QSAR. Despite this long tradition, machine learning methods gained substantial momentum
recently triggered by the success of deep learning in many application areas. 1 A wide …

Artificial intelligence based virtual screening study for competitive and allosteric inhibitors of the SARS-CoV-2 main protease

S Charles, MP Edgar, RK Mahapatra - Journal of Biomolecular …, 2023 - Taylor & Francis
SARS-CoV-2 is a highly contagious and dangerous coronavirus that first appeared in late
2019 causing COVID-19, a pandemic of acute respiratory illnesses that is still a threat to …

Complex machine learning model needs complex testing: Examining predictability of molecular binding affinity by a graph neural network

T Nikolaienko, O Gurbych… - Journal of Computational …, 2022 - Wiley Online Library
Drug discovery pipelines typically involve high‐throughput screening of large amounts of
compounds in a search of potential drugs candidates. As a chemical space of small organic …

[PDF][PDF] Assessment of potassium ion channel during electric signalling in biofilm formation of Acinetobacter baumannii for finding antibiofilm molecule

M Tiwari, S Panwar, V Tiwari - Heliyon, 2023 - cell.com
Acinetobacter baumannii is an opportunistic ESKAPE pathogen which causes nosocomial
infections and can produce biofilms that act as resistant determinants. The role of quorum …

A deep-learning approach toward rational molecular docking protocol selection

J Jiménez-Luna, A Cuzzolin, G Bolcato, M Sturlese… - Molecules, 2020 - mdpi.com
While a plethora of different protein–ligand docking protocols have been developed over the
past twenty years, their performances greatly depend on the provided input protein–ligand …