An expanded lexicon for the ubiquitin code

I Dikic, BA Schulman - Nature reviews Molecular cell biology, 2023 - nature.com
Our understanding of the ubiquitin code has greatly evolved from conventional E1, E2 and
E3 enzymes that modify Lys residues on specific substrates with a single type of ubiquitin …

Mechanisms of deubiquitinase specificity and regulation

TET Mevissen, D Komander - Annual review of biochemistry, 2017 - annualreviews.org
Protein ubiquitination is one of the most powerful posttranslational modifications of proteins,
as it regulates a plethora of cellular processes in distinct manners. Simple …

Ubiquitin-binding proteins: decoders of ubiquitin-mediated cellular functions

K Husnjak, I Dikic - Annual review of biochemistry, 2012 - annualreviews.org
Ubiquitin acts as a versatile cellular signal that controls a wide range of biological processes
including protein degradation, DNA repair, endocytosis, autophagy, transcription, immunity …

USP25 ameliorates pathological cardiac hypertrophy by stabilizing SERCA2a in cardiomyocytes

B Ye, H Zhou, Y Chen, W Luo, W Lin, Y Zhao… - Circulation …, 2023 - Am Heart Assoc
Background: Pathological cardiac hypertrophy can lead to heart failure and is one of the
leading causes of death globally. Understanding the molecular mechanism of pathological …

[HTML][HTML] Protein post-translational modifications: In silico prediction tools and molecular modeling

M Audagnotto, M Dal Peraro - Computational and structural biotechnology …, 2017 - Elsevier
Post-translational modifications (PTMs) occur in almost all proteins and play an important
role in numerous biological processes by significantly affecting proteins' structure and …

The predator becomes the prey: regulating the ubiquitin system by ubiquitylation and degradation

AM Weissman, N Shabek, A Ciechanover - Nature reviews Molecular …, 2011 - nature.com
Ubiquitylation (also known as ubiquitination) regulates essentially all of the intracellular
processes in eukaryotes through highly specific modification of numerous cellular proteins …

Post-translational modifications of deubiquitinating enzymes: expanding the ubiquitin code

Y Wang, F Wang - Frontiers in pharmacology, 2021 - frontiersin.org
Post-translational modifications such as ubiquitination play important regulatory roles in
several biological processes in eukaryotes. This process could be reversed by …

Site-specific identification and quantitation of endogenous SUMO modifications under native conditions

RJ Lumpkin, H Gu, Y Zhu, M Leonard… - Nature …, 2017 - nature.com
Small ubiquitin-like modifier (SUMO) modification regulates numerous cellular processes.
Unlike ubiquitin, detection of endogenous SUMOylated proteins is limited by the lack of …

Negative regulation of IL-17-mediated signaling and inflammation by the ubiquitin-specific protease USP25

B Zhong, X Liu, X Wang, SH Chang, X Liu, A Wang… - Nature …, 2012 - nature.com
Abstract Interleukin 17 (IL-17) is important in infection and autoimmunity; how it signals
remains poorly understood. In this study, we identified the ubiquitin-specific protease USP25 …

Huntingtin contains an ubiquitin-binding domain and regulates lysosomal targeting of mitochondrial and RNA-binding proteins

GM Fote, VV Eapen, RG Lim, C Yu, L Salazar… - Proceedings of the …, 2024 - pnas.org
Understanding the normal function of the Huntingtin (HTT) protein is of significance in the
design and implementation of therapeutic strategies for Huntington's disease (HD) …