Bulk segregation analysis in the NGS era: a review of its teenage years
Z Li, Y Xu - The Plant Journal, 2022 - Wiley Online Library
Bulk segregation analysis (BSA) utilizes a strategy of pooling individuals with extreme
phenotypes to conduct economical and rapidly linked marker screening or quantitative trait …
phenotypes to conduct economical and rapidly linked marker screening or quantitative trait …
Genomic resources in plant breeding for sustainable agriculture
Climate change during the last 40 years has had a serious impact on agriculture and
threatens global food and nutritional security. From over half a million plant species, cereals …
threatens global food and nutritional security. From over half a million plant species, cereals …
Genotyping-by-sequencing (GBS), an ultimate marker-assisted selection (MAS) tool to accelerate plant breeding
J He, X Zhao, A Laroche, ZX Lu, HK Liu… - Frontiers in plant …, 2014 - frontiersin.org
Marker-assisted selection (MAS) refers to the use of molecular markers to assist phenotypic
selections in crop improvement. Several types of molecular markers, such as single …
selections in crop improvement. Several types of molecular markers, such as single …
Sequencing pools of individuals—mining genome-wide polymorphism data without big funding
The analysis of polymorphism data is becoming increasingly important as a complementary
tool to classical genetic analyses. Nevertheless, despite plunging sequencing costs …
tool to classical genetic analyses. Nevertheless, despite plunging sequencing costs …
Arabidopsis FLL2 promotes liquid–liquid phase separation of polyadenylation complexes
An important component of cellular biochemistry is the concentration of proteins and nucleic
acids in non-membranous compartments,. These biomolecular condensates are formed …
acids in non-membranous compartments,. These biomolecular condensates are formed …
Identification of factors required for m6A mRNA methylation in Arabidopsis reveals a role for the conserved E3 ubiquitin ligase HAKAI
K Růžička, M Zhang, A Campilho, Z Bodi… - New …, 2017 - Wiley Online Library
Summary N6‐adenosine methylation (m6A) of mRNA is an essential process in most
eukaryotes, but its role and the status of factors accompanying this modification are still …
eukaryotes, but its role and the status of factors accompanying this modification are still …
QTL‐seq: rapid mapping of quantitative trait loci in rice by whole genome resequencing of DNA from two bulked populations
The majority of agronomically important crop traits are quantitative, meaning that they are
controlled by multiple genes each with a small effect (quantitative trait loci, QTL s). Mapping …
controlled by multiple genes each with a small effect (quantitative trait loci, QTL s). Mapping …
Tomato facultative parthenocarpy results from SlAGAMOUS‐LIKE 6 loss of function
C Klap, E Yeshayahou, AM Bolger… - Plant Biotechnology …, 2017 - Wiley Online Library
The extreme sensitivity of the microsporogenesis process to moderately high or low
temperatures is a major hindrance for tomato (Solanum lycopersicum) sexual reproduction …
temperatures is a major hindrance for tomato (Solanum lycopersicum) sexual reproduction …
Genome sequencing reveals agronomically important loci in rice using MutMap
The majority of agronomic traits are controlled by multiple genes that cause minor
phenotypic effects, making the identification of these genes difficult. Here we introduce …
phenotypic effects, making the identification of these genes difficult. Here we introduce …
Natural variations and genome-wide association studies in crop plants
X Huang, B Han - Annual review of plant biology, 2014 - annualreviews.org
Natural variants of crops are generated from wild progenitor plants under both natural and
human selection. Diverse crops that are able to adapt to various environmental conditions …
human selection. Diverse crops that are able to adapt to various environmental conditions …