Quantitative data analysis in single-molecule localization microscopy

YL Wu, A Tschanz, L Krupnik, J Ries - Trends in Cell Biology, 2020 - cell.com
Super-resolution microscopy, and specifically single-molecule localization microscopy
(SMLM), is becoming a transformative technology for cell biology, as it allows the study of …

PIEZO1 and PECAM1 interact at cell-cell junctions and partner in endothelial force sensing

E Chuntharpursat-Bon, OV Povstyan… - Communications …, 2023 - nature.com
Two prominent concepts for the sensing of shear stress by endothelium are the PIEZO1
channel as a mediator of mechanically activated calcium ion entry and the PECAM1 cell …

Affimers and nanobodies as molecular probes and their applications in imaging

P Cordell, G Carrington, A Curd, F Parker… - Journal of Cell …, 2022 - journals.biologists.com
Antibodies are the most widely used, traditional tool for labelling molecules in cells. In the
past five to ten years, many new labelling tools have been developed with significant …

Maximum-likelihood model fitting for quantitative analysis of SMLM data

YL Wu, P Hoess, A Tschanz, U Matti, M Mund, J Ries - Nature Methods, 2023 - nature.com
Quantitative data analysis is important for any single-molecule localization microscopy
(SMLM) workflow to extract biological insights from the coordinates of the single …

Particle fusion of super-resolution data reveals the unit structure of Nup96 in Nuclear Pore Complex

W Wang, A Jakobi, YL Wu, J Ries, S Stallinga… - Scientific Reports, 2023 - nature.com
Single molecule localization microscopy offers resolution nearly down to the molecular level
with specific molecular labelling, and is thereby a promising tool for structural biology. In …

Assessment of 3D MINFLUX data for quantitative structural biology in cells

K Prakash, AP Curd - Nature Methods, 2023 - nature.com
In 2017, Balzarotti et al. 1 introduced MINFLUX to localize individual fluorophores in single-
molecule localization microscopy by probing the emitter with a donut-shaped excitation …

[PDF][PDF] 核孔复合物单分子定位超分辨图像的筛选和重构

侯梦迪, 胡芬, 杨建宇, 董浩, 潘雷霆 - 中国激光, 2024 - researching.cn
摘要核孔复合物(NPC) 是细胞核膜上由多种蛋白组装而成的复杂结构, 在细胞核质交换和信息
传递中起着关键作用. 单分子定位超分辨成像(SMLM) 以其特异性和高成像分辨率成为研究NPC …

[HTML][HTML] Super-resolution imaging pinpoints the periodic ultrastructure at the human node of Ranvier and its disruption in patients with polyneuropathy

L Appeltshauser, J Linke, HS Heil, C Karus… - Neurobiology of …, 2023 - Elsevier
The node of Ranvier is the key element in saltatory conduction along myelinated axons, but
its specific protein organization remains elusive in the human species. To shed light on …

Raw data to results: a hands-on introduction and overview of computational analysis for single-molecule localization microscopy

KJA Martens, B Turkowyd, U Endesfelder - Frontiers in Bioinformatics, 2022 - frontiersin.org
Single-molecule localization microscopy (SMLM) is an advanced microscopy method that
uses the blinking of fluorescent molecules to determine the position of these molecules with …

A correlative super-resolution protocol to visualise structural underpinnings of fast second-messenger signalling in primary cell types

ME Hurley, TMD Sheard, R Norman, HM Kirton… - Methods, 2021 - Elsevier
Nanometre-scale cellular information obtained through super-resolution microscopies are
often unaccompanied by functional information, particularly transient and diffusible signals …