Quantum mechanical methods for drug design

T Zhou, D Huang, A Caflisch - Current topics in medicinal …, 2010 - ingentaconnect.com
Quantum mechanical (QM) methods are becoming popular in computational drug design
and development mainly because high accuracy is required to estimate (relative) binding …

Oligo(N‐alkoxy glycines): Trans substantiating peptoid conformations

PA Jordan, B Paul, GL Butterfoss, PD Renfrew… - Peptide …, 2011 - Wiley Online Library
Peptoid oligomers possess many desirable attributes as bioactive peptidomimetic agents,
including their ease of synthesis, chemical diversity, and capability for molecular recognition …

A Computational Characterization of Boron− Oxygen Multiple Bonding in HN CH− CH CH− NH− BO

JD Larkin, KL Bhat, GD Markham… - The Journal of …, 2008 - ACS Publications
Structures, relative energies, and bonding characteristics for various conformers of 3-imino-
N-(oxoboryl) prop-1-en-1-amine, HN CH− CH CH− NH− BO, and the corresponding …

The B (OH)− NH analog is a surrogate for the amide bond (CO− NH) in peptides: an ab initio study

AK Malde, SA Khedkar… - Journal of Chemical Theory …, 2007 - ACS Publications
The conformational preferences of N-methyl-methylboronamide (NMB), a B (OH)− NH
analog of the amide CO− NH in natural peptides, have been investigated at the Hartree …

Isosteres of peptides: boron analogs as dipolar forms of α‐amino acids–a theoretical study

AK Malde, SA Khedkar… - Journal of Physical …, 2007 - Wiley Online Library
Modification of peptides to produce peptidomimetics is of great interest, with the aim of
designing potent, selective, and metabolically stable analogs having certain conformational …

The− BF–NH–link as a peptide-bond surrogate

S Mathieu, G Trinquier - The Journal of Physical Chemistry B, 2012 - ACS Publications
A new peptidomimetic is proposed, resulting from substitution of the C O carbonyl group by
a B–F bond at the amide linkage. The effects of such chemical alteration are theoretically …

Exploring Unconventional Hydrogen Bonding in Boron-Dipyrromethene Derivatives Through Quantum-Mechanical Studies

MAS Shaikh, TK Khan - Available at SSRN 4813620 - papers.ssrn.com
Boron-dipyrromethenes (BODIPYs) have received great interest in the scientific community
owing to their remarkable spectral, chemical, biochemical, pharmaceutical and biophysical …