Fluorescent proteins for investigating biological events in acidic environments

H Shinoda, M Shannon, T Nagai - International journal of molecular …, 2018 - mdpi.com
The interior lumen of acidic organelles (eg, endosomes, secretory granules, lysosomes and
plant vacuoles) is an important platform for modification, transport and degradation of …

Determination of G-protein–coupled receptor oligomerization by molecular brightness analyses in single cells

A Işbilir, R Serfling, J Möller, R Thomas, C De Faveri… - Nature …, 2021 - nature.com
Oligomerization of membrane proteins has received intense research interest because of
their importance in cellular signaling and the large pharmacological and clinical potential …

Deciphering cell signaling networks with massively multiplexed biosensor barcoding

JM Yang, WY Chi, J Liang, S Takayanagi, PA Iglesias… - Cell, 2021 - cell.com
Genetically encoded fluorescent biosensors are powerful tools for monitoring biochemical
activities in live cells, but their multiplexing capacity is limited by the available spectral …

Directed evolution of a bright variant of mCherry: suppression of nonradiative decay by fluorescence lifetime selections

S Mukherjee, P Manna, ST Hung… - The Journal of …, 2022 - ACS Publications
The approximately linear scaling of fluorescence quantum yield (ϕ) with fluorescence
lifetime (τ) in fluorescent proteins (FPs) has inspired engineering of brighter fluorophores …

Enhancing chimeric antigen receptor T cell therapy by modulating the p53 signaling network with Δ133p53α

C Roselle, I Horikawa, L Chen… - Proceedings of the …, 2024 - National Acad Sciences
Chimeric antigen receptor (CAR) T cell dysfunction is a major barrier to achieving lasting
remission in hematologic cancers, especially in chronic lymphocytic leukemia (CLL). We …

A genetically encoded Ca2+ indicator based on circularly permutated sea anemone red fluorescent protein eqFP578

Y Shen, H Dana, AS Abdelfattah, R Patel, J Shea… - BMC biology, 2018 - Springer
Background Genetically encoded calcium ion (Ca 2+) indicators (GECIs) are indispensable
tools for measuring Ca 2+ dynamics and neuronal activities in vitro and in vivo. Red …

[HTML][HTML] Regulation of local GTP availability controls RAC1 activity and cell invasion

A Bianchi-Smiraglia, DW Wolff, DJ Marston… - Nature …, 2021 - nature.com
Physiological changes in GTP levels in live cells have never been considered a regulatory
step of RAC1 activation because intracellular GTP concentration (determined by …

Optimal fluorescent protein tags for quantifying protein oligomerization in living cells

V Dunsing, M Luckner, B Zühlke, RA Petazzi… - Scientific reports, 2018 - nature.com
Fluorescence fluctuation spectroscopy has become a popular toolbox for non-disruptive
analysis of molecular interactions in living cells. The quantification of protein oligomerization …

A single-domain green fluorescent protein catenane

Z Qu, J Fang, YX Wang, Y Sun, Y Liu, WH Wu… - Nature …, 2023 - nature.com
Natural proteins exhibit rich structural diversity based on the folds of an invariably linear
chain. Macromolecular catenanes that cooperatively fold into a single domain do not belong …

Direct measurement of dynamic attractant gradients reveals breakdown of the Patlak–Keller–Segel chemotaxis model

TV Phan, HH Mattingly, L Vo… - Proceedings of the …, 2024 - National Acad Sciences
Chemotactic bacteria not only navigate chemical gradients, but also shape their
environments by consuming and secreting attractants. Investigating how these processes …