[HTML][HTML] From cascaded catalytic nucleic acids to enzyme–DNA nanostructures: controlling reactivity, sensing, logic operations, and assembly of complex structures

F Wang, CH Lu, I Willner - Chemical reviews, 2014 - ACS Publications
DNA is one of the most fascinating biopolymers. Besides its central role as carrier of genetic
information and translation of the genetic code into proteins, DNA holds great promise as a …

Functional nucleic acid sensors

J Liu, Z Cao, Y Lu - Chemical reviews, 2009 - ACS Publications
Sensors are devices that respond to physical or chemical stimuli and produce detectable
signals. 1r4 They are a critical extension of human perception of the world in many aspects …

LC/MS analysis of cellular RNA reveals NAD-linked RNA

YG Chen, WE Kowtoniuk, I Agarwal, Y Shen… - Nature chemical …, 2009 - nature.com
We developed a general method to detect cellular small molecule–RNA conjugates that
does not rely on the reactivity of the small molecule. This technique revealed NAD-linked …

Metal ions turn on a stereoselective nonenzymatic reduction of keto acids by the coenzyme NADH

RJ Mayer, J Moran - Chem, 2024 - cell.com
The relationship between genetic molecules and metabolism is one of the longest-standing
problems for the origin of life. A central molecule within early metabolism is the coenzyme …

Coenzymes and their role in the evolution of life

A Kirschning - Angewandte Chemie International Edition, 2021 - Wiley Online Library
The evolution of coenzymes, or their impact on the origin of life, is fundamental for
understanding our own existence. Having established reasonable hypotheses about the …

Ribozyme catalysis of metabolism in the RNA world

X Chen, N Li, AD Ellington - Chemistry & biodiversity, 2007 - Wiley Online Library
In vitro selection has proven to be a useful means of explore the molecules and catalysts
that may have existed in a primoridal 'RNA world'. By selecting binding species (aptamers) …

Quantifying reductive amination in nonenzymatic amino acid synthesis

RJ Mayer, J Moran - Angewandte Chemie International Edition, 2022 - Wiley Online Library
Amino acid biosynthesis initiates with the reductive amination of α‐ketoglutarate with
ammonia to produce glutamate. However, the other α‐keto acids derived from the glyoxylate …

Origins of the genetic code: the escaped triplet theory

M Yarus, JG Caporaso, R Knight - Annu. Rev. Biochem., 2005 - annualreviews.org
▪ Abstract There is very significant evidence that cognate codons and/or anticodons are
unexpectedly frequent in RNA-binding sites for seven of eight biological amino acids that …

A ribozyme for the aldol reaction

S Fusz, A Eisenführ, SG Srivatsan, A Heckel… - Chemistry & biology, 2005 - cell.com
Directed in vitro evolution can create RNA catalysts for a variety of organic reactions,
supporting the" RNA world" hypothesis, which proposes that metabolic transformations in …

On the origin of life in the zinc world: 1. Photosynthesizing, porous edifices built of hydrothermally precipitated zinc sulfide as cradles of life on Earth

AY Mulkidjanian - Biology Direct, 2009 - Springer
Background The complexity of the problem of the origin of life has spawned a large number
of possible evolutionary scenarios. Their number, however, can be dramatically reduced by …