Heterogeneity of neutrophils

LG Ng, R Ostuni, A Hidalgo - Nature Reviews Immunology, 2019 - nature.com
Structured models of ontogenic, phenotypic and functional diversity have been instrumental
for a renewed understanding of the biology of immune cells, such as macrophages and …

DNA methylation: an epigenetic mark of cellular memory

M Kim, J Costello - Experimental & molecular medicine, 2017 - nature.com
DNA methylation is a stable epigenetic mark that can be inherited through multiple cell
divisions. During development and cell differentiation, DNA methylation is dynamic, but …

An atlas of active enhancers across human cell types and tissues

R Andersson, C Gebhard, I Miguel-Escalada, I Hoof… - Nature, 2014 - nature.com
Enhancers control the correct temporal and cell-type-specific activation of gene expression
in multicellular eukaryotes. Knowing their properties, regulatory activity and targets is crucial …

Epigenetic control of myeloid cell differentiation, identity and function

D Álvarez-Errico, R Vento-Tormo, M Sieweke… - Nature Reviews …, 2015 - nature.com
Myeloid cells are crucial effectors of the innate immune response and important regulators of
adaptive immunity. The differentiation and activation of myeloid cells requires the timely …

Transcribed enhancers lead waves of coordinated transcription in transitioning mammalian cells

E Arner, CO Daub, K Vitting-Seerup, R Andersson… - Science, 2015 - science.org
Although it is generally accepted that cellular differentiation requires changes to
transcriptional networks, dynamic regulation of promoters and enhancers at specific sets of …

Cell-type deconvolution from DNA methylation: a review of recent applications

AJ Titus, RM Gallimore, LA Salas… - Human molecular …, 2017 - academic.oup.com
Recent advances in cell-type deconvolution approaches are adding to our understanding of
the biology underlying disease development and progression. DNA methylation (DNAm) …

Dynamics of transcription regulation in human bone marrow myeloid differentiation to mature blood neutrophils

L Grassi, F Pourfarzad, S Ullrich, A Merkel, F Were… - Cell reports, 2018 - cell.com
Neutrophils are short-lived blood cells that play a critical role in host defense against
infections. To better comprehend neutrophil functions and their regulation, we provide a …

Methylation across the central dogma in health and diseases: new therapeutic strategies

R Liu, E Zhao, H Yu, C Yuan, MN Abbas… - Signal Transduction and …, 2023 - nature.com
The proper transfer of genetic information from DNA to RNA to protein is essential for cell-
fate control, development, and health. Methylation of DNA, RNAs, histones, and non-histone …

Epigenetics, chromatin and genome organization: recent advances from the ENCODE project

L Siggens, K Ekwall - Journal of internal medicine, 2014 - Wiley Online Library
The organization of the genome into functional units, such as enhancers and active or
repressed promoters, is associated with distinct patterns of DNA and histone modifications …

Paradigm shifts in genomics through the FANTOM projects

M de Hoon, JW Shin, P Carninci - Mammalian Genome, 2015 - Springer
Big leaps in science happen when scientists from different backgrounds interact. In the past
15 years, the FANTOM Consortium has brought together scientists from different fields to …