Structural variation in the sequencing era

SS Ho, AE Urban, RE Mills - Nature Reviews Genetics, 2020 - nature.com
Identifying structural variation (SV) is essential for genome interpretation but has been
historically difficult due to limitations inherent to available genome technologies. Detection …

Next-generation sequencing and emerging technologies

KR Kumar, MJ Cowley, RL Davis - Seminars in thrombosis and …, 2024 - thieme-connect.com
Genetic sequencing technologies are evolving at a rapid pace with major implications for
research and clinical practice. In this review, the authors provide an updated overview of …

A robust benchmark for detection of germline large deletions and insertions

JM Zook, NF Hansen, ND Olson, L Chapman… - Nature …, 2020 - nature.com
New technologies and analysis methods are enabling genomic structural variants (SVs) to
be detected with ever-increasing accuracy, resolution and comprehensiveness. To help …

[HTML][HTML] Beyond the exome: what's next in diagnostic testing for Mendelian conditions

MH Wojcik, CM Reuter, S Marwaha… - The American Journal of …, 2023 - cell.com
Despite advances in clinical genetic testing, including the introduction of exome sequencing
(ES), more than 50% of individuals with a suspected Mendelian condition lack a precise …

Next-generation sequencing to diagnose suspected genetic disorders

DR Adams, CM Eng - New England Journal of Medicine, 2018 - Mass Medical Soc
Clinical Next-Generation Sequencing—A Wild Frontier The technologies and chemistries
underlying next-generation sequencing of DNA are evolving rapidly. This review describes …

Next-generation cytogenetics: Comprehensive assessment of 52 hematological malignancy genomes by optical genome mapping

K Neveling, T Mantere, S Vermeulen… - The American Journal of …, 2021 - cell.com
Somatic structural variants (SVs) are important drivers of cancer development and
progression. In a diagnostic set-up, especially for hematological malignancies, the …

Towards improved genetic diagnosis of human differences of sex development

EC Délot, E Vilain - Nature Reviews Genetics, 2021 - nature.com
Despite being collectively among the most frequent congenital developmental conditions
worldwide, differences of sex development (DSD) lack recognition and research funding. As …

[HTML][HTML] Advances in optical mapping for genomic research

Y Yuan, CYL Chung, TF Chan - Computational and Structural …, 2020 - Elsevier
Recent advances in optical mapping have allowed the construction of improved genome
assemblies with greater contiguity. Optical mapping also enables genome comparison and …

Correction of β-thalassemia by CRISPR/Cas9 editing of the α-globin locus in human hematopoietic stem cells

G Pavani, A Fabiano, M Laurent, F Amor… - Blood …, 2021 - ashpublications.org
Abstract β-thalassemias (β-thal) are a group of blood disorders caused by mutations in the β-
globin gene (HBB) cluster. β-globin associates with α-globin to form adult hemoglobin (HbA …

Guiding the global evolution of cytogenetic testing for hematologic malignancies

YMN Akkari, LB Baughn, AM Dubuc… - Blood, The Journal …, 2022 - ashpublications.org
Cytogenetics has long represented a critical component in the clinical evaluation of
hematologic malignancies. Chromosome banding studies provide a simultaneous snapshot …