In silico pharmacology for drug discovery: methods for virtual ligand screening and profiling

S Ekins, J Mestres, B Testa - British journal of pharmacology, 2007 - Wiley Online Library
Pharmacology over the past 100 years has had a rich tradition of scientists with the ability to
form qualitative or semi‐quantitative relations between molecular structure and activity in …

In silico pharmacology for drug discovery: applications to targets and beyond

S Ekins, J Mestres, B Testa - British journal of pharmacology, 2007 - Wiley Online Library
Computational (in silico) methods have been developed and widely applied to
pharmacology hypothesis development and testing. These in silico methods include …

Comparison of deep learning with multiple machine learning methods and metrics using diverse drug discovery data sets

A Korotcov, V Tkachenko, DP Russo… - Molecular …, 2017 - ACS Publications
Machine learning methods have been applied to many data sets in pharmaceutical research
for several decades. The relative ease and availability of fingerprint type molecular …

Isolation, characterization, in vitro anticancer activity, dft calculations, molecular docking, bioactivity score, drug-likeness and admet studies of eight phytoconstituents …

DA Abdelrheem, AA Rahman, KNM Elsayed… - Journal of molecular …, 2021 - Elsevier
Recently, macroalgae or seaweeds serve as a treasure of potential drugs for cancer therapy.
The present study investigated the cytotoxic activity of eight compounds isolated from the …

Open source Bayesian models. 1. Application to ADME/Tox and drug discovery datasets

AM Clark, K Dole, A Coulon-Spektor… - Journal of chemical …, 2015 - ACS Publications
On the order of hundreds of absorption, distribution, metabolism, excretion, and toxicity
(ADME/Tox) models have been described in the literature in the past decade which are …

Machine learning models identify new inhibitors for human OATP1B1

TR Lane, F Urbina, X Zhang, M Fye… - Molecular …, 2022 - ACS Publications
The uptake transporter OATP1B1 (SLC01B1) is largely localized to the sinusoidal
membrane of hepatocytes and is a known victim of unwanted drug–drug interactions …

Machine learning techniques for in silico modeling of drug metabolism

T Fox, JM Kriegl - Current Topics in Medicinal Chemistry, 2006 - ingentaconnect.com
The computational assessment of drug metabolism has gained considerable interest in
pharmaceutical research. Amongst others, machine learning techniques have been …

Insights for human ether-a-go-go-related gene potassium channel inhibition using recursive partitioning and Kohonen and Sammon mapping techniques

S Ekins, KV Balakin, N Savchuk… - Journal of medicinal …, 2006 - ACS Publications
The human ether-a-go-go related gene (hERG) can be inhibited by marketed drugs, and this
inhibition may lead to QT prolongation and possibly fatal cardiac arrhythmia. We have …

Enhancing drug discovery through in silico screening: strategies to increase true positives retrieval rates

J Kirchmair, S Distinto, D Schuster… - Current medicinal …, 2008 - ingentaconnect.com
Computational chemistry software for lead discovery has become well established in
pharmaceutical industry and has found its way to the desktop computers of medicinal …

Recent advances in measurement of metabolic clearance, metabolite profile and reaction phenotyping of low clearance compounds

L Di - Expert Opinion on Drug Discovery, 2023 - Taylor & Francis
Introduction Low metabolic clearance is usually a highly desirable property of drug
candidates in order to reduce dose and dosing frequency. However, measurement of low …