Pulling and pushing protein molecules by AFM

A Ikai, R Afrin, H Sekiguchi - Current Nanoscience, 2007 - ingentaconnect.com
This paper reviews a recent progress of molecular level studies on the rigidity of surface
immobilized as well as membrane bound proteins embedded in the lipid bilayer. Some …

A theory for viral capsid assembly around electrostatic cores

MF Hagan - The Journal of chemical physics, 2009 - pubs.aip.org
We develop equilibrium and kinetic theories that describe the assembly of viral capsid
proteins on a charged central core, as seen in recent experiments in which brome mosaic …

Bending the Rules: Amplifying PD-L1 Immunoregulatory Function Through Flexible Polyethylene Glycol Synthetic Linkers

NM Racca, A Dontu, K Riley, ES Yolcu… - … Engineering Part A, 2024 - liebertpub.com
Immune checkpoint signaling, such as programmed cell death protein-1 (PD-1), is a key
target for immunotherapy due to its role in dampening immune responses. PD-1 signaling in …

Elasticity of single flexible polymer chains in good and poor solvents

V Ahlawat, SS Rajput, S Patil - Polymer, 2021 - Elsevier
Force versus extension curves measure entropic elasticity of single polymer chain in force
spectroscopy experiments. A Worm-like Chain model is used to describe force extension …

The nano-scale viscoelasticity using atomic force microscopy in liquid environment

SS Rajput, SPS Deopa, J Yadav, V Ahlawat… - …, 2020 - iopscience.iop.org
We measured viscoelasticity of two nanoscale systems, single protein molecules and
molecular layers of water confined between solid walls. In order to quantify the viscoelastic …

Viscoelasticity of single folded proteins using dynamic atomic force microscopy

SPS Deopa, S Patil - Soft Matter, 2023 - pubs.rsc.org
The advent of atomic force microscopy, along with optical tweezers, ushered in a new field of
single molecule force spectroscopy, wherein the response of a single protein or a …

[HTML][HTML] Quantitative elasticity of flexible polymer chains using interferometer-based AFM

V Ahlawat, SPS Deopa, S Patil - Nanomaterials, 2022 - mdpi.com
We estimate the elasticity of single polymer chains using atomic force microscope (AFM)-
based oscillatory experiments. An accurate estimate of elasticity using AFM is limited by …

[HTML][HTML] The effect of temperature on mechanical resistance of the native and intermediate states of I27

Y Taniguchi, DJ Brockwell, M Kawakami - Biophysical journal, 2008 - cell.com
We investigated the effect of temperature on the mechanical unfolding of I27 from human
cardiac titin, employing a custom-built temperature control device for single-molecule atomic …

[HTML][HTML] Can dissipative properties of single molecules be extracted from a force spectroscopy experiment?

F Benedetti, Y Gazizova, AJ Kulik, PE Marszalek… - Biophysical journal, 2016 - cell.com
We performed dynamic force spectroscopy of single dextran and titin I27 molecules using
small-amplitude and low-frequency (40–240 Hz) dithering of an atomic force microscope tip …

[HTML][HTML] Dynamics of the coiled-coil unfolding transition of myosin rod probed by dissipation force spectrum

Y Taniguchi, BS Khatri, DJ Brockwell, E Paci… - Biophysical journal, 2010 - cell.com
The motor protein myosin II plays a crucial role in muscle contraction. The mechanical
properties of its coiled-coil region, the myosin rod, are important for effective force …