Integrating genomics into the taxonomy and systematics of the Bacteria and Archaea
The polyphasic approach used today in the taxonomy and systematics of the Bacteria and
Archaea includes the use of phenotypic, chemotaxonomic and genotypic data. The use of …
Archaea includes the use of phenotypic, chemotaxonomic and genotypic data. The use of …
From culturomics to taxonomogenomics: a need to change the taxonomy of prokaryotes in clinical microbiology
By diversifying culture conditions, in a strategy named culturomics, we were able in a short
time to grow 124 new bacterial species from human stools, including 39 strict anaerobes. To …
time to grow 124 new bacterial species from human stools, including 39 strict anaerobes. To …
Robust demarcation of 17 distinct Bacillus species clades, proposed as novel Bacillaceae genera, by phylogenomics and comparative genomic analyses: description …
To clarify the evolutionary relationships and classification of Bacillus species,
comprehensive phylogenomic and comparative analyses were performed on> 300 …
comprehensive phylogenomic and comparative analyses were performed on> 300 …
Phylogenomics and Comparative Genomic Studies Robustly Support Division of the Genus Mycobacterium into an Emended Genus Mycobacterium and Four Novel …
The genus Mycobacterium contains 188 species including several major human pathogens
as well as numerous other environmental species. We report here comprehensive …
as well as numerous other environmental species. We report here comprehensive …
Genome-based phylogeny and taxonomy of the 'Enterobacteriales': proposal for Enterobacterales ord. nov. divided into the families Enterobacteriaceae, Erwiniaceae …
Understanding of the phylogeny and interrelationships of the genera within the order
'Enterobacteriales' has proven difficult using the 16S rRNA gene and other single-gene or …
'Enterobacteriales' has proven difficult using the 16S rRNA gene and other single-gene or …
A phylogenomic and comparative genomic framework for resolving the polyphyly of the genus Bacillus: Proposal for six new genera of Bacillus species, Peribacillus …
The genus Bacillus, harbouring 293 species/subspecies, constitutes a phylogenetically
incoherent group. In the absence of reliable means for grouping known Bacillus species into …
incoherent group. In the absence of reliable means for grouping known Bacillus species into …
Phylogenomic analyses and molecular signatures for the class Halobacteria and its two major clades: a proposal for division of the class Halobacteria into an emended order Halobacteriales and two new orders …
The Halobacteria constitute one of the largest groups within the Archaea. The hierarchical
relationship among members of this large class, which comprises a single order and a …
relationship among members of this large class, which comprises a single order and a …
A phylogenomic and molecular marker based proposal for the division of the genus Borrelia into two genera: the emended genus Borrelia containing only the members of the relapsing fever Borrelia …
The genus Borrelia contains two groups of organisms: the causative agents of Lyme disease
and their relatives and the causative agents of relapsing fever and their relatives. These two …
and their relatives and the causative agents of relapsing fever and their relatives. These two …
Phylogenomics and comparative genomic studies delineate six main clades within the family Enterobacteriaceae and support the reclassification of several …
S Alnajar, RS Gupta - Infection, Genetics and Evolution, 2017 - Elsevier
The family Enterobacteriaceae harbors many important pathogens, however it has proven
difficult to reliably distinguish different members of this family or discern their …
difficult to reliably distinguish different members of this family or discern their …
A phylogenomic reappraisal of family-level divisions within the class Halobacteria: proposal to divide the order Halobacteriales into the families Halobacteriaceae …
The evolutionary interrelationships between the archaeal organisms which comprise the
class Halobacteria have proven difficult to elucidate using traditional phylogenetic tools. The …
class Halobacteria have proven difficult to elucidate using traditional phylogenetic tools. The …