[HTML][HTML] Achievements and prospects of genomics-assisted breeding in three legume crops of the semi-arid tropics
Advances in next-generation sequencing and genotyping technologies have enabled
generation of large-scale genomic resources such as molecular markers, transcript reads …
generation of large-scale genomic resources such as molecular markers, transcript reads …
Breeding strategies for adaptation of pearl millet and sorghum to climate variability and change in West Africa
BIG Haussmann, H Fred Rattunde… - Journal of Agronomy …, 2012 - Wiley Online Library
Semi‐arid and subhumid West Africa is characterized by high inter‐annual rainfall
variability, with variable onset of the rainy season, somewhat more predictable endings, and …
variability, with variable onset of the rainy season, somewhat more predictable endings, and …
Large‐scale development of cost‐effective SNP marker assays for diversity assessment and genetic mapping in chickpea and comparative mapping in legumes
PJ Hiremath, A Kumar, RV Penmetsa… - Plant biotechnology …, 2012 - Wiley Online Library
A set of 2486 single nucleotide polymorphisms (SNPs) were compiled in chickpea using four
approaches, namely (i) Solexa/Illumina sequencing (1409),(ii) amplicon sequencing of …
approaches, namely (i) Solexa/Illumina sequencing (1409),(ii) amplicon sequencing of …
High-density linkage map construction and mapping of seed trait QTLs in chickpea (Cicer arietinum L.) using Genotyping-by-Sequencing (GBS)
S Verma, S Gupta, N Bandhiwal, T Kumar… - Scientific reports, 2015 - nature.com
This study reports the use of Genotyping-by-Sequencing (GBS) for large-scale SNP
discovery and simultaneous genotyping of recombinant inbred lines (RILs) of an intra …
discovery and simultaneous genotyping of recombinant inbred lines (RILs) of an intra …
Comparative analysis of kabuli chickpea transcriptome with desi and wild chickpea provides a rich resource for development of functional markers
Chickpea (Cicer arietinum L.) is an important crop legume plant with high nutritional value.
The transcriptomes of desi and wild chickpea have already been sequenced. In this study …
The transcriptomes of desi and wild chickpea have already been sequenced. In this study …
Translational genomics in agriculture: some examples in grain legumes
Recent advances in genomics and associated disciplines like bioinformatics have made it
possible to develop genomic resources, such as large-scale sequence data for any crop …
possible to develop genomic resources, such as large-scale sequence data for any crop …
SNP genotyping in melons: genetic variation, population structure, and linkage disequilibrium
C Esteras, G Formisano, C Roig, A Díaz… - Theoretical and Applied …, 2013 - Springer
Novel sequencing technologies were recently used to generate sequences from multiple
melon (Cucumis melo L.) genotypes, enabling the in silico identification of large single …
melon (Cucumis melo L.) genotypes, enabling the in silico identification of large single …
High-Throughput SNP Discovery and Genotyping for Constructing a Saturated Linkage Map of Chickpea (Cicer arietinum L.)
The present study reports the large-scale discovery of genome-wide single-nucleotide
polymorphisms (SNPs) in chickpea, identified mainly through the next generation …
polymorphisms (SNPs) in chickpea, identified mainly through the next generation …
Functionally relevant microsatellite markers from chickpea transcription factor genes for efficient genotyping applications and trait association mapping
We developed 1108 transcription factor gene-derived microsatellite (TFGMS) and 161
transcription factor functional domain-associated microsatellite (TFFDMS) markers from 707 …
transcription factor functional domain-associated microsatellite (TFFDMS) markers from 707 …
EST-SNP discovery and dense genetic mapping in lentil (Lens culinaris Medik.) enable candidate gene selection for boron tolerance
S Kaur, NOI Cogan, A Stephens, D Noy… - Theoretical and Applied …, 2014 - Springer
Key message Large-scale SNP discovery and dense genetic mapping in a lentil intraspecific
cross permitted identification of a single chromosomal region controlling tolerance to boron …
cross permitted identification of a single chromosomal region controlling tolerance to boron …