A survey of methods for 3D histology reconstruction
Histology permits the observation of otherwise invisible structures of the internal topography
of a specimen. Although it enables the investigation of tissues at a cellular level, it is invasive …
of a specimen. Although it enables the investigation of tissues at a cellular level, it is invasive …
A population MRI brain template and analysis tools for the macaque
The use of standard anatomical templates is common in human neuroimaging, as it
facilitates data analysis and comparison across subjects and studies. For non-human …
facilitates data analysis and comparison across subjects and studies. For non-human …
[HTML][HTML] The Allen mouse brain common coordinate framework: a 3D reference atlas
Recent large-scale collaborations are generating major surveys of cell types and
connections in the mouse brain, collecting large amounts of data across modalities, spatial …
connections in the mouse brain, collecting large amounts of data across modalities, spatial …
[HTML][HTML] A high-resolution probabilistic in vivo atlas of human subcortical brain nuclei
Recent advances in magnetic resonance imaging methods, including data acquisition, pre-
processing and analysis, have benefited research on the contributions of subcortical brain …
processing and analysis, have benefited research on the contributions of subcortical brain …
[HTML][HTML] Waxholm Space atlas of the Sprague Dawley rat brain
Three-dimensional digital brain atlases represent an important new generation of
neuroinformatics tools for understanding complex brain anatomy, assigning location to …
neuroinformatics tools for understanding complex brain anatomy, assigning location to …
The importance of being variable
New work suggests that blood oxygen level-dependent (BOLD) signal variability can be a
much more powerful index of human age than mean activation, and that older brains are …
much more powerful index of human age than mean activation, and that older brains are …
High resolution three-dimensional brain atlas using an average magnetic resonance image of 40 adult C57Bl/6J mice
Detailed anatomical atlases can provide considerable interpretive power in studies of both
human and rodent neuroanatomy. Here we describe a three-dimensional atlas of the mouse …
human and rodent neuroanatomy. Here we describe a three-dimensional atlas of the mouse …
Blood oxygen level-dependent signal variability is more than just noise
Functional magnetic resonance imaging (fMRI) research often attributes blood oxygen level-
dependent (BOLD) signal variance to measurement-related confounds. However, what is …
dependent (BOLD) signal variance to measurement-related confounds. However, what is …
[HTML][HTML] A comprehensive macaque fMRI pipeline and hierarchical atlas
Functional neuroimaging research in the non-human primate (NHP) has been advancing at
a remarkable rate. The increase in available data establishes a need for robust analysis …
a remarkable rate. The increase in available data establishes a need for robust analysis …
[HTML][HTML] Behavioral phenotypes of Disc1 missense mutations in mice
SJ Clapcote, TV Lipina, JK Millar, S Mackie, S Christie… - Neuron, 2007 - cell.com
To support the role of DISC1 in human psychiatric disorders, we identified and analyzed two
independently derived ENU-induced mutations in Exon 2 of mouse Disc1. Mice with …
independently derived ENU-induced mutations in Exon 2 of mouse Disc1. Mice with …