Birth and death of histone mRNAs

WF Marzluff, KP Koreski - Trends in Genetics, 2017 - cell.com
In metazoans, histone mRNAs are not polyadenylated but end in a conserved stem-loop.
Stem-loop binding protein (SLBP) binds to the stem-loop and is required for all steps in …

Histone supply: Multitiered regulation ensures chromatin dynamics throughout the cell cycle

S Mendiratta, A Gatto, G Almouzni - Journal of Cell Biology, 2019 - rupress.org
As the building blocks of chromatin, histones are central to establish and maintain particular
chromatin states associated with given cell fates. Importantly, histones exist as distinct …

Genome-wide ATAC-see screening identifies TFDP1 as a modulator of global chromatin accessibility

S Ishii, T Kakizuka, SJ Park, A Tagawa, C Sanbo… - Nature …, 2024 - nature.com
Chromatin accessibility is a hallmark of active regulatory regions and is functionally linked to
transcriptional networks and cell identity. However, the molecular mechanisms and networks …

RSAT matrix-clustering: dynamic exploration and redundancy reduction of transcription factor binding motif collections

JA Castro-Mondragon, S Jaeger, D Thieffry… - Nucleic Acids …, 2017 - academic.oup.com
Transcription factor (TF) databases contain multitudes of binding motifs (TFBMs) from
various sources, from which non-redundant collections are derived by manual curation. The …

E2F4 regulates transcriptional activation in mouse embryonic stem cells independently of the RB family

J Hsu, J Arand, A Chaikovsky, NA Mooney… - Nature …, 2019 - nature.com
E2F transcription factors are central regulators of cell division and cell fate decisions. E2F4
often represents the predominant E2F activity in cells. E2F4 is a transcriptional repressor …

Oocyte-derived factors (GDF9 and BMP15) and FSH regulate AMH expression via modulation of H3K27AC in granulosa cells

S Roy, D Gandra, C Seger, A Biswas, VA Kushnir… - …, 2018 - academic.oup.com
Anti–Müllerian hormone (AMH) produced by ovarian granulosa cells (GCs) plays a crucial
role in ovarian function. It is used as a diagnostic and/or prognostic marker of fertility as well …

Screen for reactivation of MeCP2 on the inactive X chromosome identifies the BMP/TGF-β superfamily as a regulator of XIST expression

S Sripathy, V Leko, RL Adrianse… - Proceedings of the …, 2017 - National Acad Sciences
Rett syndrome (RS) is a debilitating neurological disorder affecting mostly girls with
heterozygous mutations in the gene encoding the methyl-CpG–binding protein MeCP2 on …

Specificities and genomic distribution of somatic mammalian histone H1 subtypes

L Millán-Ariño, A Izquierdo-Bouldstridge… - Biochimica et Biophysica …, 2016 - Elsevier
Histone H1 is a structural component of chromatin that may have a role in the regulation of
chromatin dynamics. Unlike core histones, the linker histone H1 family is evolutionarily …

DNA methylation and histone variants in aging and cancer

A Mangelinck, C Mann - International Review of Cell and Molecular Biology, 2021 - Elsevier
Aging-related diseases such as cancer can be traced to the accumulation of molecular
disorder including increased DNA mutations and epigenetic drift. We provide a …

Heterochromatin Protein 1β (HP1β) has distinct functions and distinct nuclear distribution in pluripotent versus differentiated cells

A Mattout, Y Aaronson, BS Sailaja, EV Raghu Ram… - Genome biology, 2015 - Springer
Background Pluripotent embryonic stem cells (ESCs) have the unique ability to differentiate
into every cell type and to self-renew. These characteristics correlate with a distinct nuclear …