Trajectory of livestock genomics in South Asia: a comprehensive review

M Panigrahi, H Kumar, KA Saravanan, D Rajawat… - Gene, 2022 - Elsevier
Livestock plays a central role in sustaining human livelihood in South Asia. There are
numerous and distinct livestock species in South Asian countries. Several of them have …

Progress and future perspectives of livestock genomics in India: a mini review

KA Saravanan, M Panigrahi, H Kumar… - Animal …, 2023 - Taylor & Francis
The field of genetics has evolved a lot after the emergence of molecular and advanced
genomic technologies. The advent of Next Generation Sequencing, SNP genotyping …

Uncovering genes underlying coat color variation in indigenous cattle breeds through genome-wide positive selection

D Rajawat, M Panigrahi, SS Nayak… - Animal …, 2023 - Taylor & Francis
The identification of candidate genes related to pigmentation and under selective sweep
provides insights into the genetic basis of pigmentation and the evolutionary forces that have …

Genome-wide assessment of genetic diversity, linkage disequilibrium and haplotype block structure in Tharparkar cattle breed of India

KA Saravanan, M Panigrahi, H Kumar… - Animal …, 2022 - Taylor & Francis
Abstract Knowledge about genetic diversity is very essential for the management and
sustainable utilization of livestock genetic resources. In this study, we presented a …

Signatures of selection in composite Vrindavani cattle of India

A Singh, A Mehrotra, C Gondro, ARS Romero… - Frontiers in …, 2020 - frontiersin.org
Vrindavani is an Indian composite cattle breed developed by crossbreeding taurine dairy
breeds with native indicine cattle. The constituent breeds were selected for higher milk …

[HTML][HTML] Revelation of genomic breed composition in a crossbred cattle of India with the help of Bovine50K BeadChip

SF Ahmad, M Panigrahi, S Chhotaray, D Pal, S Parida… - Genomics, 2020 - Elsevier
The aim of the present study was to assess the population structure and admixture levels in
the Vrindavani composite population in India by using Bovine50KSNP BeadChip data …

Genome-wide association study reveals genes crucial for coat color production in Vrindavani cattle

S Chhotaray, M Panigrahi, B Bhushan, GK Gaur, T Dutt… - Livestock Science, 2021 - Elsevier
Coat colour and various patterns are the hallmarked qualitative traits studied in cattle as well
as other livestock; however, variation in this trait is resultant of interactions and epistasis of a …

Estimation of linkage disequilibrium levels and allele frequency distribution in crossbred Vrindavani cattle using 50K SNP data

A Singh, A Kumar, A Mehrotra, AK Pandey, BP Mishra… - Plos one, 2021 - journals.plos.org
The objective of this study was to calculate the extent and decay of linkage disequilibrium
(LD) in 96 crossbred Vrindavani cattle genotyped with Bovine SNP50K Bead Chip. After …

Genome-wide assessment of runs of homozygosity and estimates of genomic inbreeding in a chinese composite pig breed

Z Xu, S Mei, J Zhou, Y Zhang, M Qiao, H Sun, Z Li… - Frontiers in …, 2021 - frontiersin.org
The primary purpose of the current study was to assess the genetic diversity, runs of
homozygosity (ROH) and ROH islands in a Chinese composite pig and explore hotspot …

Molecular characterization of CRBR2 fragment of TLR4 gene in association with mastitis in Vrindavani cattle

M Panigrahi, H Kumar, SS Nayak, D Rajawat… - Microbial …, 2022 - Elsevier
The bovine TLR4 gene is an interesting candidate marker for mastitis resistance, since it is
involved in neutrophil migration to and from the mammary gland during mastitis. TLR4 …