Fluorescent proteins and genetically encoded biosensors

M Wang, Y Da, Y Tian - Chemical Society Reviews, 2023 - pubs.rsc.org
The genetically encoded fluorescent sensors convert chemical and physical signals into
light. They are powerful tools for the visualisation of physiological processes in living cells …

Fluorescent proteins and their applications in imaging living cells and tissues

DM Chudakov, MV Matz, S Lukyanov… - Physiological …, 2010 - journals.physiology.org
Green fluorescent protein (GFP) from the jellyfish Aequorea victoria and its homologs from
diverse marine animals are widely used as universal genetically encoded fluorescent labels …

A network of macrophages supports mitochondrial homeostasis in the heart

JA Nicolás-Ávila, AV Lechuga-Vieco… - Cell, 2020 - cell.com
Cardiomyocytes are subjected to the intense mechanical stress and metabolic demands of
the beating heart. It is unclear whether these cells, which are long-lived and rarely renew …

Measuring in vivo mitophagy

N Sun, J Yun, J Liu, D Malide, C Liu, II Rovira… - Molecular cell, 2015 - cell.com
Alterations in mitophagy have been increasingly linked to aging and age-related diseases.
There are, however, no convenient methods to analyze mitophagy in vivo. Here, we …

[HTML][HTML] A sensitive and quantitative technique for detecting autophagic events based on lysosomal delivery

H Katayama, T Kogure, N Mizushima, T Yoshimori… - Chemistry & biology, 2011 - cell.com
We sought to develop a sensitive and quantitative technique capable of monitoring the
entire flux of autophagy involving fusion of lysosomal membranes. We observed the …

[HTML][HTML] Mammalian hybrid pre-autophagosomal structure HyPAS generates autophagosomes

S Kumar, R Javed, M Mudd, S Pallikkuth, KA Lidke… - Cell, 2021 - cell.com
The biogenesis of mammalian autophagosomes remains to be fully defined. Here, we used
cellular and in vitro membrane fusion analyses to show that autophagosomes are formed …

Imaging intracellular pH in live cells with a genetically encoded red fluorescent protein sensor

M Tantama, YP Hung, G Yellen - Journal of the American …, 2011 - ACS Publications
Intracellular pH affects protein structure and function, and proton gradients underlie the
function of organelles such as lysosomes and mitochondria. We engineered a genetically …

Protein import motor complex reacts to mitochondrial misfolding by reducing protein import and activating mitophagy

JB Michaelis, ME Brunstein, S Bozkurt, L Alves… - Nature …, 2022 - nature.com
Mitophagy is essential to maintain mitochondrial function and prevent diseases. It activates
upon mitochondria depolarization, which causes PINK1 stabilization on the mitochondrial …

Alternative mitochondrial quality control mediated by extracellular release

CJ Choong, T Okuno, K Ikenaka, K Baba… - Autophagy, 2021 - Taylor & Francis
Mitochondrial quality control, which is crucial for maintaining cellular homeostasis, has been
considered to be achieved exclusively through mitophagy. Here we report an alternative …

Mitophagy is primarily due to alternative autophagy and requires the MAPK1 and MAPK14 signaling pathways

Y Hirota, S Yamashita, Y Kurihara, X Jin, M Aihara… - Autophagy, 2015 - Taylor & Francis
In cultured cells, not many mitochondria are degraded by mitophagy induced by
physiological cellular stress. We observed mitophagy in HeLa cells using a method that …