Integrating gene annotation with orthology inference at scale
Annotating coding genes and inferring orthologs are two classical challenges in genomics
and evolutionary biology that have traditionally been approached separately, limiting …
and evolutionary biology that have traditionally been approached separately, limiting …
Next generation sequencing revolutionizes organismal biology research in bats
The advent of next generation sequencing technologies (NGS) has greatly accelerated our
understanding of critical aspects of organismal biology from non-model organisms. Bats …
understanding of critical aspects of organismal biology from non-model organisms. Bats …
A comparative analysis of planarian genomes reveals regulatory conservation in the face of rapid structural divergence
M Ivanković, JN Brand, L Pandolfini, T Brown… - Nature …, 2024 - nature.com
The planarian Schmidtea mediterranea is being studied as a model species for
regeneration, but the assembly of planarian genomes remains challenging. Here, we report …
regeneration, but the assembly of planarian genomes remains challenging. Here, we report …
The evolution of sanguivory in vampire bats: origins and convergences
Blood-feeding (sanguivory) has evolved more than two dozen times among birds, fishes,
insects, arachnids, molluscs, crustaceans, and annelids; however, among mammals, it is …
insects, arachnids, molluscs, crustaceans, and annelids; however, among mammals, it is …
[HTML][HTML] Co-option of an astacin metalloprotease is associated with an evolutionarily novel feeding morphology in a predatory nematode
Y Ishita, A Onodera, T Ekino, T Chihara… - Molecular Biology and …, 2023 - ncbi.nlm.nih.gov
Animals consume a wide variety of food sources to adapt to different environments.
However, the genetic mechanisms underlying the acquisition of evolutionarily novel feeding …
However, the genetic mechanisms underlying the acquisition of evolutionarily novel feeding …
Vision-related convergent gene losses reveal SERPINE3's unknown role in the eye
H Indrischek, J Hammer, A Machate, N Hecker… - Elife, 2022 - elifesciences.org
Despite decades of research, knowledge about the genes that are important for
development and function of the mammalian eye and are involved in human eye disorders …
development and function of the mammalian eye and are involved in human eye disorders …
Haplotype-resolved genome and population genomics of the threatened garden dormouse in Europe
PA Byerly, A von Thaden, E Leushkin… - Genome …, 2024 - genome.cshlp.org
Genomic resources are important for evaluating genetic diversity and supporting
conservation efforts. The garden dormouse (Eliomys quercinus) is a small rodent that has …
conservation efforts. The garden dormouse (Eliomys quercinus) is a small rodent that has …
Reference-quality bat genomes illuminate adaptations to viral tolerance and disease resistance
Bats carry viruses that can cause severe disease in other mammals. Asymptomatic
infections in bats suggest limited tissue-damaging inflammation and immunopathology. To …
infections in bats suggest limited tissue-damaging inflammation and immunopathology. To …
Chromosome level genome assembly of the Etruscan shrew Suncus etruscus
YV Bukhman, S Meyer, LF Chu, L Abueg… - Scientific Data, 2024 - nature.com
Suncus etruscus is one of the world's smallest mammals, with an average body mass of
about 2 grams. The Etruscan shrew's small body is accompanied by a very high energy …
about 2 grams. The Etruscan shrew's small body is accompanied by a very high energy …
[PDF][PDF] Long-read sequencing reveals rapid evolution of immunity-and cancer-related genes in bats
A Scheben, O Mendivil Ramos… - Genome biology and …, 2023 - academic.oup.com
Bats are exceptional among mammals for their powered flight, extended lifespans, and
robust immune systems and therefore have been of particular interest in comparative …
robust immune systems and therefore have been of particular interest in comparative …