Using chemical shift perturbation to characterise ligand binding
MP Williamson - Progress in nuclear magnetic resonance spectroscopy, 2013 - Elsevier
Chemical shift perturbation (CSP, chemical shift mapping or complexation-induced changes
in chemical shift, CIS) follows changes in the chemical shifts of a protein when a ligand is …
in chemical shift, CIS) follows changes in the chemical shifts of a protein when a ligand is …
Molecular structure of amyloid fibrils: insights from solid-state NMR
R Tycko - Quarterly reviews of biophysics, 2006 - cambridge.org
1. Introduction 22. Sources of structural information in solid-state NMR data 52.1 General
remarks 52.2 Chemical shifts, linewidths, and magic-angle spinning 62.3 Dipole–dipole …
remarks 52.2 Chemical shifts, linewidths, and magic-angle spinning 62.3 Dipole–dipole …
Chemical shifts in molecular solids by machine learning
Due to their strong dependence on local atonic environments, NMR chemical shifts are
among the most powerful tools for strucutre elucidation of powdered solids or amorphous …
among the most powerful tools for strucutre elucidation of powdered solids or amorphous …
SHIFTX2: significantly improved protein chemical shift prediction
B Han, Y Liu, SW Ginzinger, DS Wishart - Journal of biomolecular NMR, 2011 - Springer
A new computer program, called SHIFTX2, is described which is capable of rapidly and
accurately calculating diamagnetic 1 H, 13 C and 15 N chemical shifts from protein …
accurately calculating diamagnetic 1 H, 13 C and 15 N chemical shifts from protein …
A structural model for Alzheimer's β-amyloid fibrils based on experimental constraints from solid state NMR
AT Petkova, Y Ishii, JJ Balbach… - Proceedings of the …, 2002 - National Acad Sciences
We present a structural model for amyloid fibrils formed by the 40-residue β-amyloid peptide
associated with Alzheimer's disease (Aβ1–40), based on a set of experimental constraints …
associated with Alzheimer's disease (Aβ1–40), based on a set of experimental constraints …
SPARTA+: a modest improvement in empirical NMR chemical shift prediction by means of an artificial neural network
NMR chemical shifts provide important local structural information for proteins and are key in
recently described protein structure generation protocols. We describe a new chemical shift …
recently described protein structure generation protocols. We describe a new chemical shift …
Rapid and accurate calculation of protein 1H, 13C and 15N chemical shifts
S Neal, AM Nip, H Zhang, DS Wishart - Journal of biomolecular NMR, 2003 - Springer
A computer program (SHIFTX) is described which rapidly and accurately calculates the
diamagnetic 1 H, 13 C and 15 N chemical shifts of both backbone and sidechain atoms in …
diamagnetic 1 H, 13 C and 15 N chemical shifts of both backbone and sidechain atoms in …
RefDB: a database of uniformly referenced protein chemical shifts
H Zhang, S Neal, DS Wishart - Journal of biomolecular NMR, 2003 - Springer
RefDB is a secondary database of reference-corrected protein chemical shifts derived from
the BioMagResBank (BMRB). The database was assembled by using a recently developed …
the BioMagResBank (BMRB). The database was assembled by using a recently developed …
DANGLE: A Bayesian inferential method for predicting protein backbone dihedral angles and secondary structure
MS Cheung, ML Maguire, TJ Stevens… - Journal of magnetic …, 2010 - Elsevier
This paper introduces DANGLE, a new algorithm that employs Bayesian inference to
estimate the likelihood of all possible values of the backbone dihedral angles ϕ and ψ for …
estimate the likelihood of all possible values of the backbone dihedral angles ϕ and ψ for …
Interpreting protein chemical shift data
DS Wishart - Progress in nuclear magnetic resonance spectroscopy, 2011 - Elsevier
Chemical shifts are the mileposts of NMR. For more than 60 years [1, 2], they have been
used by chemists as highly reproducible, easily measured parameters to map out the …
used by chemists as highly reproducible, easily measured parameters to map out the …