Ecosystems monitoring powered by environmental genomics: a review of current strategies with an implementation roadmap

T Cordier, L Alonso‐Sáez… - Molecular …, 2021 - Wiley Online Library
A decade after environmental scientists integrated high‐throughput sequencing
technologies in their toolbox, the genomics‐based monitoring of anthropogenic impacts on …

Bioremediation of hazardous heavy metals by marine microorganisms: a recent review

AN Alabssawy, AH Hashem - Archives of Microbiology, 2024 - Springer
Abstract Heavy metals (HMs) like Zn, Cu, Pb, Ni, Cd, and Hg, among others, play a role in
several environmental problems. The marine environment is polluted by several …

Biodegradation of crude oil and Corexit 9500 in Arctic seawater

KM McFarlin, MJ Perkins, JA Field… - Frontiers in Microbiology, 2018 - frontiersin.org
The need to understand the biodegradation of oil and chemical dispersants in Arctic marine
environments is increasing alongside growth in oil exploration and transport in the region …

Oil type and temperature dependent biodegradation dynamics-Combining chemical and microbial community data through multivariate analysis

D Ribicic, KM McFarlin, R Netzer, OG Brakstad… - BMC microbiology, 2018 - Springer
Background This study investigates a comparative multivariate approach for studying the
biodegradation of chemically dispersed oil. The rationale for this approach lies in the …

Simultaneous analysis of seven 16S rRNA hypervariable gene regions increases efficiency in marine bacterial diversity detection

K Leontidou, IL Abad‐Recio, V Rubel… - Environmental …, 2023 - Wiley Online Library
Environmental DNA sequencing is the gold standard to reveal microbial community
structures. In most applications, a one‐fragment PCR approach is applied to amplify a …

[HTML][HTML] Potential for natural attenuation of crude oil hydrocarbons in benthic microbiomes near coastal communities in Kivalliq, Nunavut, Canada

M Ji, AF Smith, JE Rattray, WE England… - Marine Pollution …, 2023 - Elsevier
Oil spilled in marine environments can settle to the seafloor through aggregation and
sedimentation processes. This has been predicted to be especially relevant in the Arctic due …

Testing the efficiency of a bacterial community-based index (microgAMBI) to assess distinct impact sources in six locations around the world

A Borja - Ecological Indicators, 2018 - Elsevier
MicrogAMBI is a bacterial community-based index, recently developed to assess the
ecological status of marine systems. The easy access to High Throughput Sequencing …

Microbial communities in seawater from an Arctic and a temperate Norwegian fjord and their potentials for biodegradation of chemically dispersed oil at low seawater …

D Ribicic, R Netzer, A Winkler, OG Brakstad - Marine pollution bulletin, 2018 - Elsevier
Biodegradation of chemically dispersed oil at low temperature (0–2° C) was compared in
natural seawater from Arctic (Svalbard) and a temperate (Norway) fjords. The oil was …

[HTML][HTML] Biodegradation of weathered crude oil in seawater with frazil ice

S Lofthus, I Bakke, J Tremblay, CW Greer… - Marine Pollution …, 2020 - Elsevier
As ice extent in the Arctic is declining, oil and gas activities will increase, with higher risk of
oil spills to the marine environment. To determine biotransformation of dispersed weathered …

Functional gene composition and metabolic potential of deep-sea coral-associated microbial communities

ZA Pratte, FJ Stewart, CA Kellogg - Coral Reefs, 2023 - Springer
Over the past decade, an abundance of 16S rRNA gene surveys have provided
microbiologists with data regarding the prokaryotes present in a coral-associated microbial …