Intrinsic disorder, protein–protein interactions, and disease

VN Uversky - Advances in protein chemistry and structural biology, 2018 - Elsevier
It is recognized now that biologically active proteins without stable tertiary structure (known
as intrinsically disordered proteins, IDPs) and hybrid proteins containing ordered domains …

F/YGG-motif is an intrinsically disordered nucleic-acid binding motif

J Van Lindt, T Lazar, D Pakravan, M Demulder… - RNA biology, 2022 - Taylor & Francis
Heterogeneous nuclear ribonucleoproteins (hnRNP) function in RNA processing, have RNA-
recognition motifs (RRMs) and intrinsically disordered, low-complexity domains (LCDs) …

[HTML][HTML] Phylogeny of NF-YA trans-activation splicing isoforms in vertebrate evolution

A Bernardini, A Gallo, N Gnesutta, D Dolfini… - Genomics, 2022 - Elsevier
NF-Y is a trimeric pioneer Transcription Factor (TF) whose target sequence–the CCAAT box–
is present in~ 25% of mammalian promoters. We reconstruct the phylogenetic history of the …

NF-YA isoforms with alternative splicing of exon-5 in Aves

A Gallo, D Dolfini, A Bernardini, N Gnesutta… - Genomics, 2023 - Elsevier
NF-YA, the regulatory subunit of the trimeric CCAAT-binding transcription factor NF-Y, is
present in vertebrates in two major alternative spliced isoforms: NF-YAl and NF-YAs …

Molecular dynamics simulations of the intrinsically disordered protein amelogenin

A Apicella, M Marascio, V Colangelo… - Journal of …, 2017 - Taylor & Francis
Amelogenin refers to a class of intrinsically disordered proteins that are the major
constituents of enamel matrix derivative (EMD), an extract of porcine fetal teeth used in …

Sequence fingerprints distinguish erroneous from correct predictions of intrinsically disordered protein regions

KM Saravanan, AK Dunker… - Journal of Biomolecular …, 2018 - Taylor & Francis
More than 60 prediction methods for intrinsically disordered proteins (IDPs) have been
developed over the years, many of which are accessible on the World Wide Web. Nearly, all …

Composition-related structural transition of random peptides: insight into the boundary between intrinsically disordered proteins and folded proteins

W Kang, C He, Z Liu, J Wang… - Journal of Biomolecular …, 2019 - Taylor & Francis
Previous studies based on bioinformatics showed that there is a sharp distinction of
structural features and residue composition between the intrinsically disordered proteins …

Exploring the sequence–structure–function relationship for the intrinsically disordered βγ-crystallin Hahellin

M Gao, F Yang, L Zhang, Z Su… - Journal of Biomolecular …, 2018 - Taylor & Francis
βγ-Crystallins are a superfamily of proteins containing crystallin-type Greek key motifs. Some
βγ-crystallin domains have been shown to bind Ca2+. Hahellin is a newly identified …

[图书][B] Functional Adaptation of C-Myc and Its Role in Lymphoma-associated Gene Regulation

AN Mahani - 2018 - search.proquest.com
The Myc proto-oncogene, is a highly disordered (lack of structure formation) transcription
factor (TF), which can bind to its partner proteins and regulate different biological functions of …