The sound of silence: Transgene silencing in mammalian cell engineering

A Cabrera, HI Edelstein, F Glykofrydis, KS Love… - Cell Systems, 2022 - cell.com
To elucidate principles operating in native biological systems and to develop novel
biotechnologies, synthetic biology aims to build and integrate synthetic gene circuits within …

[HTML][HTML] Context-aware synthetic biology by controller design: Engineering the mammalian cell

N Shakiba, RD Jones, R Weiss, D Del Vecchio - Cell systems, 2021 - cell.com
The rise of systems biology has ushered a new paradigm: the view of the cell as a system
that processes environmental inputs to drive phenotypic outputs. Synthetic biology provides …

A multiplexed single-cell CRISPR screening platform enables systematic dissection of the unfolded protein response

B Adamson, TM Norman, M Jost, MY Cho, JK Nuñez… - Cell, 2016 - cell.com
Functional genomics efforts face tradeoffs between number of perturbations examined and
complexity of phenotypes measured. We bridge this gap with Perturb-seq, which combines …

Efficient and robust NK-cell transduction with baboon envelope pseudotyped lentivector

ABL Colamartino, W Lemieux, P Bifsha… - Frontiers in …, 2019 - frontiersin.org
NK-cell resistance to transduction is a major technical hurdle for developing NK-cell
immunotherapy. By using Baboon envelope pseudotyped lentiviral vectors (BaEV-LVs) …

Compromised function of the ESCRT pathway promotes endolysosomal escape of tau seeds and propagation of tau aggregation

JJ Chen, DL Nathaniel, P Raghavan, M Nelson… - Journal of Biological …, 2019 - ASBMB
Intercellular propagation of protein aggregation is emerging as a key mechanism in the
progression of several neurodegenerative diseases, including Alzheimer's disease and …

SHIELD: a platform for high-throughput screening of barrier-type DNA elements in human cells

M Zhang, ME Ehmann, S Matukumalli, AG Boob… - Nature …, 2023 - nature.com
Chromatin boundary elements contribute to the partitioning of mammalian genomes into
topological domains to regulate gene expression. Certain boundary elements are adopted …

Functional single-cell genomics of human cytomegalovirus infection

MY Hein, JS Weissman - Nature Biotechnology, 2022 - nature.com
Understanding how viral and host factors interact and how perturbations impact infection is
the basis for designing antiviral interventions. Here we define the functional contribution of …

In situ peroxidase labeling and mass-spectrometry connects alpha-synuclein directly to endocytic trafficking and mRNA metabolism in neurons

CY Chung, V Khurana, S Yi, N Sahni, KH Loh… - Cell systems, 2017 - cell.com
Synucleinopathies, including Parkinson's disease (PD), are associated with the misfolding
and mistrafficking of alpha-synuclein (α-syn). Here, using an ascorbate peroxidase (APEX) …

Stable expression of large transgenes via the knock-in of an integrase-deficient lentivirus

M Chavez, DA Rane, X Chen, LS Qi - Nature biomedical engineering, 2023 - nature.com
The targeted insertion and stable expression of a large genetic payload in primary human
cells demands methods that are robust, efficient and easy to implement. Large payload …

[HTML][HTML] Scalable generation of functional human iPSC-derived CAR-macrophages that efficiently eradicate CD19-positive leukemia

SM Abdin, D Paasch, A Kloos, MC Oliveira… - … for Immunotherapy of …, 2023 - ncbi.nlm.nih.gov
Background Macrophages have recently become attractive therapeutics in cancer
immunotherapy. The potential of macrophages to infiltrate and influence solid malignancies …