[HTML][HTML] A decade of molecular cell atlases

SR Quake - Trends in genetics, 2022 - cell.com
In recent years there has been tremendous progress towards deep molecular
characterization of cell types using single-cell transcriptome sequencing, creating so-called …

Nondestructive 3D pathology with light-sheet fluorescence microscopy for translational research and clinical assays

JTC Liu, AK Glaser, C Poudel… - Annual Review of …, 2023 - annualreviews.org
In recent years, there has been a revived appreciation for the importance of spatial context
and morphological phenotypes for both understanding disease progression and guiding …

A hybrid open-top light-sheet microscope for versatile multi-scale imaging of cleared tissues

AK Glaser, KW Bishop, LA Barner, EA Susaki… - Nature …, 2022 - nature.com
Light-sheet microscopy has emerged as the preferred means for high-throughput volumetric
imaging of cleared tissues. However, there is a need for a flexible system that can address …

Squid: simplifying quantitative imaging platform development and deployment

H Li, D Krishnamurthy, E Li, P Vyas, N Akireddy, C Chai… - bioRxiv, 2020 - biorxiv.org
With rapid developments in microscopy methods, highly versatile, robust and affordable
implementations are needed to enable rapid and wide adoption by the biological sciences …

Single-objective high-resolution confocal light sheet fluorescence microscopy for standard biological sample geometries

S Yordanov, K Neuhaus, R Hartmann… - Biomedical optics …, 2021 - opg.optica.org
Three-dimensional fluorescence-based imaging of living cells and organisms requires the
sample to be exposed to substantial excitation illumination energy, typically causing …

Dual-view light-sheet imaging through a tilted glass interface using a deformable mirror

N Vladimirov, F Preusser, J Wisniewski… - Biomedical optics …, 2021 - opg.optica.org
Light-sheet microscopy has become indispensable for imaging developing organisms, and
imaging from multiple directions (views) is essential to improve its spatial resolution. We …

Brain-wide imaging of an adult vertebrate with image transfer oblique plane microscopy

M Hoffmann, J Henninger, L Richter, B Judkewitz - bioRxiv, 2022 - biorxiv.org
Optical imaging is a powerful tool to visualise and measure neuronal activity. However, due
to the size and opacity of vertebrate brains it has until now been impossible to …

A fully water coupled oblique light-sheet microscope

Y Gong, Y Tian, C Baker - Scientific Reports, 2022 - nature.com
Recently developed descanned versions of the oblique light-sheet microscope promise to
enable high-frame rate volumetric imaging in a variety of convenient preparations. The …

Development of planar illumination strategies for solving mysteries in the sub-cellular realm

T Teranikar, J Lim, T Ijaseun, J Lee - International Journal of Molecular …, 2022 - mdpi.com
Optical microscopy has vastly expanded the frontiers of structural and functional biology,
due to the non-invasive probing of dynamic volumes in vivo. However, traditional widefield …

Light sheet fluorescence microscopy illuminating soft matter

R You, R McGorty - Frontiers in Physics, 2021 - frontiersin.org
Volumetric microscopic imaging data acquired at high speeds is often needed in studies of
soft matter. Several microscopy techniques exist for this purpose, but a relative newcomer is …