Nuclear phylotranscriptomics and phylogenomics support numerous polyploidization events and hypotheses for the evolution of rhizobial nitrogen-fixing symbiosis in …

Y Zhao, R Zhang, KW Jiang, J Qi, Y Hu, J Guo, R Zhu… - Molecular plant, 2021 - cell.com
Fabaceae are the third largest angiosperm family, with 765 genera and∼ 19 500 species.
They are important both economically and ecologically, and global Fabaceae crops are …

The flying spider-monkey tree fern genome provides insights into fern evolution and arborescence

X Huang, W Wang, T Gong, D Wickell, LY Kuo… - Nature Plants, 2022 - nature.com
To date, little is known about the evolution of fern genomes, with only two small genomes
published from the heterosporous Salviniales. Here we assembled the genome of Alsophila …

Underwater CAM photosynthesis elucidated by Isoetes genome

D Wickell, LY Kuo, HP Yang, A Dhabalia Ashok… - Nature …, 2021 - nature.com
To conserve water in arid environments, numerous plant lineages have independently
evolved Crassulacean Acid Metabolism (CAM). Interestingly, Isoetes, an aquatic lycophyte …

Phylotranscriptomics resolves the phylogeny of Pooideae and uncovers factors for their adaptive evolution

L Zhang, X Zhu, Y Zhao, J Guo, T Zhang… - Molecular Biology …, 2022 - academic.oup.com
Adaptation to cool climates has occurred several times in different angiosperm groups.
Among them, Pooideae, the largest grass subfamily with∼ 3,900 species including wheat …

Phylotranscriptomics in Cucurbitaceae reveal multiple whole-genome duplications and key morphological and molecular innovations

J Guo, W Xu, Y Hu, J Huang, Y Zhao, L Zhang… - Molecular Plant, 2020 - cell.com
The ability of climbing plants to grow upward along others to reach the canopy for
photosynthesis is hypothesized as a key innovation in flowering plants. Most members of the …

All together now: Cellular and molecular aspects of leaf development in lycophytes, ferns, and seed plants

MA Romanova, VV Domashkina… - Frontiers in Ecology …, 2023 - frontiersin.org
Recent advances in plant developmental genetics together with rapid accumulation of
transcriptomic data on plants from divergent lineages provide an exciting opportunity to …

The evolutionary innovation of root suberin lamellae contributed to the rise of seed plants

Y Su, T Feng, CB Liu, H Huang, YL Wang, X Fu… - Nature Plants, 2023 - nature.com
Seed plants overtook ferns to become the dominant plant group during the late
Carboniferous, a period in which the climate became colder and dryer,. However, the …

An open and continuously updated fern tree of life

JH Nitta, E Schuettpelz, S Ramírez-Barahona… - Frontiers in Plant …, 2022 - frontiersin.org
Ferns, with about 12,000 species, are the second most diverse lineage of vascular plants
after angiosperms. They have been the subject of numerous molecular phylogenetic studies …

Evolutionary genomic insights into cyanobacterial symbioses in plants

S de Vries, J de Vries - Quantitative Plant Biology, 2022 - cambridge.org
Photosynthesis, the ability to fix atmospheric carbon dioxide, was acquired by eukaryotes
through symbiosis: the plastids of plants and algae resulted from a cyanobacterial symbiosis …

Simultaneous diversification of Polypodiales and angiosperms in the Mesozoic

XY Du, JM Lu, LB Zhang, J Wen, LY Kuo… - …, 2021 - Wiley Online Library
Comprising about 82% of the extant fern species diversity, Polypodiales are generally
believed to have diversified in the Late Cretaceous. We estimated the divergence times of …