Long non-coding RNAs: the regulatory mechanisms, research strategies, and future directions in cancers

N Gao, Y Li, J Li, Z Gao, Z Yang, Y Li, H Liu… - Frontiers in …, 2020 - frontiersin.org
The development and application of whole genome sequencing technology has greatly
broadened our horizons on the capabilities of long non-coding RNAs (lncRNAs). LncRNAs …

The how and why of lncRNA function: an innate immune perspective

EK Robinson, S Covarrubias, S Carpenter - Biochimica et Biophysica Acta …, 2020 - Elsevier
Next-generation sequencing has provided a more complete picture of the composition of the
human transcriptome indicating that much of the “blueprint” is a vastness of poorly …

LCAT3, a novel m6A-regulated long non-coding RNA, plays an oncogenic role in lung cancer via binding with FUBP1 to activate c-MYC

X Qian, J Yang, Q Qiu, X Li, C Jiang, J Li… - Journal of hematology & …, 2021 - Springer
Abstract Background Long non-coding RNAs (lncRNAs) are important epigenetic regulators,
which play critical roles in diverse physiological and pathological processes. However, the …

lncRNAfunc: a knowledgebase of lncRNA function in human cancer

M Yang, H Lu, J Liu, S Wu, P Kim… - Nucleic acids research, 2022 - academic.oup.com
The long non-coding RNAs associating with other molecules can coordinate several
physiological processes and their dysfunction can impact diverse human diseases. To date …

Circular RNA circAGO2 drives cancer progression through facilitating HuR-repressed functions of AGO2-miRNA complexes

Y Chen, F Yang, E Fang, W Xiao, H Mei, H Li… - Cell Death & …, 2019 - nature.com
Abstract Argonaute 2 (AGO2), the core component of microRNA (miRNA)-induced silencing
complex, plays a compelling role in tumorigenesis and aggressiveness. However, the …

[HTML][HTML] Circular RNA circDLC1 inhibits MMP1-mediated liver cancer progression via interaction with HuR

H Liu, T Lan, H Li, L Xu, X Chen, H Liao, X Chen… - Theranostics, 2021 - ncbi.nlm.nih.gov
Rationale: circular RNAs (circRNAs) have been demonstrated to play a crucial role in cancer
progression. KIAA1429, a key component of the m6A methyltransferase complex, has …

LncRNA HIF1A-AS1 promotes gemcitabine resistance of pancreatic cancer by enhancing glycolysis through modulating the AKT/YB1/HIF1α pathway

F Xu, M Huang, Q Chen, Y Niu, Y Hu, P Hu, D Chen… - Cancer research, 2021 - AACR
Gemcitabine (GEM) resistance is a major challenge for chemotherapy of pancreatic cancer.
Previous studies have reported on the role of long noncoding RNA (lncRNA) in …

Prediction of RNA-protein sequence and structure binding preferences using deep convolutional and recurrent neural networks

X Pan, P Rijnbeek, J Yan, HB Shen - BMC genomics, 2018 - Springer
Background RNA regulation is significantly dependent on its binding protein partner, known
as the RNA-binding proteins (RBPs). Unfortunately, the binding preferences for most RBPs …

RNA structure drives interaction with proteins

N Sanchez de Groot, A Armaos… - Nature …, 2019 - nature.com
The combination of high-throughput sequencing and in vivo crosslinking approaches leads
to the progressive uncovering of the complex interdependence between cellular …

A circular RNA derived from the insulin receptor locus protects against doxorubicin-induced cardiotoxicity

D Lu, S Chatterjee, K Xiao, I Riedel… - European heart …, 2022 - academic.oup.com
Aims Cardiotoxicity leading to heart failure (HF) is a growing problem in many cancer
survivors. As specific treatment strategies are not available, RNA discovery pipelines were …