Highlights on selected microscopy techniques to study zebrafish developmental biology
A Abu-Siniyeh, W Al-Zyoud - Laboratory Animal Research, 2020 - Springer
Bio-imaging is a tedious task when it concerns exploring cell functions, developmental
mechanisms, and other vital processes in vivo. Single-cell resolution is challenging due to …
mechanisms, and other vital processes in vivo. Single-cell resolution is challenging due to …
Zebrafish vascular quantification: a tool for quantification of three-dimensional zebrafish cerebrovascular architecture by automated image analysis
EC Kugler, J Frost, V Silva, K Plant… - …, 2022 - journals.biologists.com
Zebrafish transgenic lines and light sheet fluorescence microscopy allow in-depth insights
into three-dimensional vascular development in vivo. However, quantification of the …
into three-dimensional vascular development in vivo. However, quantification of the …
Vessel Metrics: A software tool for automated analysis of vascular structure in confocal imaging
SD McGarry, C Adjekukor, S Ahuja… - Microvascular …, 2024 - Elsevier
Images contain a wealth of information that is often under analyzed in biological studies.
Developmental models of vascular disease are a powerful way to quantify developmentally …
Developmental models of vascular disease are a powerful way to quantify developmentally …
Application of the rolling ball algorithm to measure phase volume fraction from backscattered electron images
MCM Rodrigues, M Militzer - Materials Characterization, 2020 - Elsevier
The backscattered electron (BSE) mode in the scanning electron microscope has been
frequently used to characterize phases with different chemical compositions in metals and …
frequently used to characterize phases with different chemical compositions in metals and …
Enhancement and segmentation workflow for the developing zebrafish vasculature
Zebrafish have become an established in vivo vertebrate model to study cardiovascular
development and disease. However, most published studies of the zebrafish vascular …
development and disease. However, most published studies of the zebrafish vascular …
The effect of absent blood flow on the zebrafish cerebral and trunk vasculature
E Kugler, R Snodgrass, G Bowley, K Plant… - Vascular …, 2021 - vb.bioscientifica.com
The role of blood flow in vascular development is complex and context-dependent. In this
study, we quantify the effect of the lack of blood flow on embryonic vascular development on …
study, we quantify the effect of the lack of blood flow on embryonic vascular development on …
Segmentation of the zebrafish brain vasculature from light sheet fluorescence microscopy datasets
Light sheet fluorescent microscopy allows imaging of zebrafish vascular development in
great detail. However, interpretation of data often relies on visual assessment and …
great detail. However, interpretation of data often relies on visual assessment and …
Validating segmentation of the zebrafish vasculature
The zebrafish is an established vertebrate model to study development and disease of the
cardiovascular system. Using transgenic lines and state-of-the-art microscopy it is possible …
cardiovascular system. Using transgenic lines and state-of-the-art microscopy it is possible …
Vessel Metrics: A python based software tool for automated analysis of vascular structure in confocal imaging
SD McGarry, C Adjekukor, S Ahuja, J Greysson-Wong… - bioRxiv, 2022 - biorxiv.org
Images contain a wealth of information that is often under analyzed in biological studies.
Developmental models of vascular disease are a powerful way to quantify developmentally …
Developmental models of vascular disease are a powerful way to quantify developmentally …
Analytical Approaches for the Segmentation of the Zebrafish Brain Vasculature
With advancements in imaging techniques, data visualization allows new insights into
fundamental biological processes of development and disease. However, although …
fundamental biological processes of development and disease. However, although …