Base excision repair

HE Krokan, M Bjørås - Cold Spring Harbor perspectives …, 2013 - cshperspectives.cshlp.org
Base excision repair (BER) corrects DNA damage from oxidation, deamination and
alkylation. Such base lesions cause little distortion to the DNA helix structure. BER is …

Molecular mechanisms of somatic hypermutation and class switch recombination

SP Methot, JM Di Noia - Advances in immunology, 2017 - Elsevier
In order to promote an efficient humoral immune response, germinal center B cells modify
both the antigen recognition and effector domains by programmed genetic alterations of …

Linking post-translational modifications and protein turnover by site-resolved protein turnover profiling

J Zecha, W Gabriel, R Spallek, YC Chang… - Nature …, 2022 - nature.com
Proteome-wide measurements of protein turnover have largely ignored the impact of post-
translational modifications (PTMs). To address this gap, we employ stable isotope labeling …

DNA glycosylases: in DNA repair and beyond

AL Jacobs, P Schär - Chromosoma, 2012 - Springer
The base excision repair machinery protects DNA in cells from the damaging effects of
oxidation, alkylation, and deamination; it is specialized to fix single-base damage in the form …

[HTML][HTML] Cell cycle regulation of human DNA repair and chromatin remodeling genes

R Mjelle, SA Hegre, PA Aas, G Slupphaug, F Drabløs… - DNA repair, 2015 - Elsevier
Maintenance of a genome requires DNA repair integrated with chromatin remodeling. We
have analyzed six transcriptome data sets and one data set on translational regulation of …

The current state of eukaryotic DNA base damage and repair

NC Bauer, AH Corbett, PW Doetsch - Nucleic acids research, 2015 - academic.oup.com
DNA damage is a natural hazard of life. The most common DNA lesions are base, sugar,
and single-strand break damage resulting from oxidation, alkylation, deamination, and …

AID and somatic hypermutation

RW Maul, PJ Gearhart - Advances in immunology, 2010 - Elsevier
In response to an assault by foreign organisms, peripheral B cells can change their antibody
affinity and isotype by somatically mutating their genomic DNA. The ability of a cell to modify …

[HTML][HTML] Replication protein A: directing traffic at the intersection of replication and repair

GG Oakley, SM Patrick - Frontiers in bioscience: a journal and …, 2010 - ncbi.nlm.nih.gov
Since the initial discovery of replication protein A (RPA) as a DNA replication factor, much
progress has been made on elucidating critical roles for RPA in other DNA metabolic …

Base excision repair, a pathway regulated by posttranslational modifications

RJ Carter, JL Parsons - Molecular and cellular biology, 2016 - Taylor & Francis
Base excision repair (BER) is an essential DNA repair pathway involved in the maintenance
of genome stability and thus in the prevention of human diseases, such as premature aging …

Repair of oxidatively induced DNA damage by DNA glycosylases: mechanisms of action, substrate specificities and excision kinetics

M Dizdaroglu, E Coskun, P Jaruga - Mutation Research/Reviews in …, 2017 - Elsevier
Endogenous and exogenous reactive species cause oxidatively induced DNA damage in
living organisms by a variety of mechanisms. As a result, a plethora of mutagenic and/or …