Zooming in on the phycosphere: the ecological interface for phytoplankton–bacteria relationships
By controlling nutrient cycling and biomass production at the base of the food web,
interactions between phytoplankton and bacteria represent a fundamental ecological …
interactions between phytoplankton and bacteria represent a fundamental ecological …
Microbial ecology of mountain glacier ecosystems: biodiversity, ecological connections and implications of a warming climate
Glacier ecosystems are teeming with life on, beneath, and to a lesser degree, within their icy
masses. This conclusion largely stems from polar research, with less attention paid to …
masses. This conclusion largely stems from polar research, with less attention paid to …
CheckV assesses the quality and completeness of metagenome-assembled viral genomes
Millions of new viral sequences have been identified from metagenomes, but the quality and
completeness of these sequences vary considerably. Here we present CheckV, an …
completeness of these sequences vary considerably. Here we present CheckV, an …
Chemotaxis shapes the microscale organization of the ocean's microbiome
The capacity of planktonic marine microorganisms to actively seek out and exploit
microscale chemical hotspots has been widely theorized to affect ocean-basin scale …
microscale chemical hotspots has been widely theorized to affect ocean-basin scale …
Glacier ice archives nearly 15,000-year-old microbes and phages
Background Glacier ice archives information, including microbiology, that helps reveal
paleoclimate histories and predict future climate change. Though glacier-ice microbes are …
paleoclimate histories and predict future climate change. Though glacier-ice microbes are …
Soil viruses are underexplored players in ecosystem carbon processing
Rapidly thawing permafrost harbors∼ 30 to 50% of global soil carbon, and the fate of this
carbon remains unknown. Microorganisms will play a central role in its fate, and their viruses …
carbon remains unknown. Microorganisms will play a central role in its fate, and their viruses …
GraftM: a tool for scalable, phylogenetically informed classification of genes within metagenomes
Large-scale metagenomic datasets enable the recovery of hundreds of population genomes
from environmental samples. However, these genomes do not typically represent the full …
from environmental samples. However, these genomes do not typically represent the full …
Defining the human gut host–phage network through single-cell viral tagging
Viral discovery is accelerating at an unprecedented rate due to continuing advances in
culture-independent sequence-based analyses. One important facet of this discovery is …
culture-independent sequence-based analyses. One important facet of this discovery is …
Historical contingencies and phage induction diversify bacterioplankton communities at the microscale
In many natural environments, microorganisms decompose microscale resource patches
made of complex organic matter. The growth and collapse of populations on these resource …
made of complex organic matter. The growth and collapse of populations on these resource …
Glacier-preserved Tibetan Plateau viral community probably linked to warm–cold climate variations
ZP Zhong, O Zablocki, YF Li, JL Van Etten… - Nature …, 2024 - nature.com
Glaciers archive time-structured information on climates and ecosystems, including
microorganisms. However, the long-term ecogenomic dynamics or biogeography of the …
microorganisms. However, the long-term ecogenomic dynamics or biogeography of the …