Seven Year Itch: Pan-Assay Interference Compounds (PAINS) in 2017 Utility and Limitations

JB Baell, JWM Nissink - ACS chemical biology, 2018 - ACS Publications
Pan-Assay Interference Compounds (PAINS) are very familiar to medicinal chemists who
have spent time fruitlessly trying to optimize these nonprogressible compounds. Electronic …

Counting on natural products for drug design

T Rodrigues, D Reker, P Schneider, G Schneider - Nature chemistry, 2016 - nature.com
Natural products and their molecular frameworks have a long tradition as valuable starting
points for medicinal chemistry and drug discovery. Recently, there has been a revitalization …

Enhancing activity prediction models in drug discovery with the ability to understand human language

P Seidl, A Vall, S Hochreiter… - … on Machine Learning, 2023 - proceedings.mlr.press
Activity and property prediction models are the central workhorses in drug discovery and
materials sciences, but currently, they have to be trained or fine-tuned for new tasks. Without …

Role of computer-aided drug design in modern drug discovery

SJY Macalino, V Gosu, S Hong, S Choi - Archives of pharmacal research, 2015 - Springer
Drug discovery utilizes chemical biology and computational drug design approaches for the
efficient identification and optimization of lead compounds. Chemical biology is mostly …

Drug repurposing: Misconceptions, challenges, and opportunities for academic researchers

CG Begley, M Ashton, J Baell, M Bettess… - Science Translational …, 2021 - science.org
Drug repurposing is promoted as a cost-and time-effective mechanism for providing new
medicines. Often, however, there is insufficient consideration by academic researchers of …

Feeling nature's PAINS: natural products, natural product drugs, and pan assay interference compounds (PAINS)

JB Baell - Journal of natural products, 2016 - ACS Publications
We have previously reported on classes of compounds that can interfere with bioassays via
a number of different mechanisms and termed such compounds Pan Assay INterference …

Anthraquinones as pharmacological tools and drugs

EM Malik, CE Müller - Medicinal research reviews, 2016 - Wiley Online Library
Abstract Anthraquinones (9, 10‐dioxoanthracenes) constitute an important class of natural
and synthetic compounds with a wide range of applications. Besides their utilization as …

An aggregation advisor for ligand discovery

JJ Irwin, D Duan, H Torosyan, AK Doak… - Journal of medicinal …, 2015 - ACS Publications
Colloidal aggregation of organic molecules is the dominant mechanism for artifactual
inhibition of proteins, and controls against it are widely deployed. Notwithstanding an …

Virtual screening strategies in drug discovery: a critical review

A Lavecchia, C Di Giovanni - Current medicinal chemistry, 2013 - ingentaconnect.com
Virtual screening (VS) is a powerful technique for identifying hit molecules as starting points
for medicinal chemistry. The number of methods and softwares which use the ligand and …

New substructure filters for removal of pan assay interference compounds (PAINS) from screening libraries and for their exclusion in bioassays

JB Baell, GA Holloway - Journal of medicinal chemistry, 2010 - ACS Publications
This report describes a number of substructural features which can help to identify
compounds that appear as frequent hitters (promiscuous compounds) in many biochemical …