Probabilistic and statistical properties of words: an overview

G Reinert, S Schbath, MS Waterman - Journal of Computational …, 2000 - liebertpub.com
In the following, an overview is given on statistical and probabilistic properties of words, as
occurring in the analysis of biological sequences. Counts of occurrence, counts of clumps …

[图书][B] Runs and scans with applications

N Balakrishnan, MV Koutras - 2011 - books.google.com
Expert practical and theoretical coverage of runs and scans This volume presents both
theoretical and applied aspects of runs and scans, and illustrates their important role in …

[图书][B] Statistical methods in bioinformatics: an introduction

WJ Ewens, GR Grant - 2005 - Springer
Advances in computers and biotechnology have had a profound impact on biomedical
research, and as a result complex data sets can now be generated to address extremely …

Extreme value methods with applications to finance

SY Novak - Monographs on Statistics and Applied Probability, 2011 - api.taylorfrancis.com
Extreme value theory (EVT) deals with extreme (rare) events. Such events/variables are
often reported as outliers. In some textbooks one can find recommendations to remove …

An overview on the distribution of word counts in Markov chains

S Schbath - Journal of Computational Biology, 2000 - liebertpub.com
In this paper, we give an overview about the different results existing on the statistical
distribution of word counts in a Markovian sequence of letters. Results concerning the …

[图书][B] DNA, words and models: statistics of exceptional words

S Robin, F Rodolphe, S Schbath - 2005 - books.google.com
Introduction. The context--Randomness and models--A bit of biology--Simple models for
biological sequences. Why a model?--Permutation model--Bernoulli model--Introduction to …

FADO: a statistical method to detect favored or avoided distances between occurrences of motifs using the Hawkes' model

G Gusto, S Schbath - … Applications in Genetics and Molecular Biology, 2005 - degruyter.com
We propose an original statistical method to estimate how the occurrences of a given
process along a genome, genes or motifs for instance, may be influenced by the …

Pattern Markov chains: optimal Markov chain embedding through deterministic finite automata

G Nuel - Journal of Applied Probability, 2008 - cambridge.org
In the framework of patterns in random texts, the Markov chain embedding techniques
consist of turning the occurrences of a pattern over an order-m Markov sequence into those …

[图书][B] Introduction to Hidden Semi-Markov Models

J Van der Hoek, RJ Elliott - 2018 - books.google.com
Markov chains and hidden Markov chains have applications in many areas of engineering
and genomics. This book provides a basic introduction to the subject by first developing the …

Numerical comparison of several approximations of the word count distribution in random sequences

S Robin, S Schbath - Journal of Computational Biology, 2001 - liebertpub.com
The exact distribution of word counts in random sequences and several approximations
have been proposed in the past few years. The exact distribution has no theoretical limit but …