Diversification, adaptation, and community assembly of the American oaks (Quercus), a model clade for integrating ecology and evolution
J Cavender‐Bares - New Phytologist, 2019 - Wiley Online Library
Contents Summary 669 I. Model clades for the study and integration of ecology and
evolution 670 II. Oaks: an important model clade 671 III. Insights from the history of the …
evolution 670 II. Oaks: an important model clade 671 III. Insights from the history of the …
Application of somatic embryogenesis in woody plants.
Y Guan, SG Li, XF Fan, ZH Su - Frontiers in Plant Science, 2016 - frontiersin.org
Somatic embryogenesis is a developmental process where a plant somatic cell can
dedifferentiate to a totipotent embryonic stem cell that has the ability to give rise to an …
dedifferentiate to a totipotent embryonic stem cell that has the ability to give rise to an …
Oak genome reveals facets of long lifespan
Oaks are an important part of our natural and cultural heritage. Not only are they ubiquitous
in our most common landscapes but they have also supplied human societies with …
in our most common landscapes but they have also supplied human societies with …
Genomic landscape of the global oak phylogeny
The tree of life is highly reticulate, with the history of population divergence emerging from
populations of gene phylogenies that reflect histories of introgression, lineage sorting and …
populations of gene phylogenies that reflect histories of introgression, lineage sorting and …
Signatures of local adaptation in candidate genes of oaks (Quercus spp.) with respect to present and future climatic conditions
Testing how populations are locally adapted and predicting their response to their future
environment is of key importance in view of climate change. Landscape genomics is a …
environment is of key importance in view of climate change. Landscape genomics is a …
Comparative performance of the BGISEQ-500 vs Illumina HiSeq2500 sequencing platforms for palaeogenomic sequencing
SST Mak, S Gopalakrishnan, C Carøe, C Geng… - …, 2017 - academic.oup.com
Ancient DNA research has been revolutionized following development of next-generation
sequencing platforms. Although a number of such platforms have been applied to ancient …
sequencing platforms. Although a number of such platforms have been applied to ancient …
Species‐wide patterns of DNA methylation variation in Quercus lobata and their association with climate gradients
PF Gugger, S Fitz‐Gibbon, M PellEgrini… - Molecular …, 2016 - Wiley Online Library
DNA methylation in plants affects transposon silencing, transcriptional regulation and thus
phenotypic variation. One unanswered question is whether DNA methylation could be …
phenotypic variation. One unanswered question is whether DNA methylation could be …
Low number of fixed somatic mutations in a long-lived oak tree
E Schmid-Siegert, N Sarkar, C Iseli, S Calderon… - Nature Plants, 2017 - nature.com
Because plants do not possess a defined germline, deleterious somatic mutations can be
passed to gametes, and a large number of cell divisions separating zygote from gamete …
passed to gametes, and a large number of cell divisions separating zygote from gamete …
First Draft Assembly and Annotation of the Genome of a California Endemic Oak Quercus lobata Née (Fagaceae)
Oak represents a valuable natural resource across Northern Hemisphere ecosystems,
attracting a large research community studying its genetics, ecology, conservation, and …
attracting a large research community studying its genetics, ecology, conservation, and …
Landscape genomics of Quercus lobata reveals genes involved in local climate adaptation at multiple spatial scales
PF Gugger, ST Fitz‐Gibbon, A Albarrán‐Lara… - Molecular …, 2021 - Wiley Online Library
Understanding how the environment shapes genetic variation provides critical insight about
the evolution of local adaptation in natural populations. At multiple spatial scales and …
the evolution of local adaptation in natural populations. At multiple spatial scales and …