A new way to contemplate Darwin's tangled bank: how DNA barcodes are reconnecting biodiversity science and biomonitoring
Encompassing the breadth of biodiversity in biomonitoring programmes has been frustrated
by an inability to simultaneously identify large numbers of species accurately and in a timely …
by an inability to simultaneously identify large numbers of species accurately and in a timely …
Large-scale monitoring of plants through environmental DNA metabarcoding of soil: recovery, resolution, and annotation of four DNA markers
In a rapidly changing world we need methods to efficiently assess biodiversity in order to
monitor ecosystem trends. Ecological monitoring often uses plant community composition to …
monitor ecosystem trends. Ecological monitoring often uses plant community composition to …
Advances and limitations of next generation sequencing in animal diet analysis
G Liu, S Zhang, X Zhao, C Li, M Gong - Genes, 2021 - mdpi.com
Diet analysis is a critical content of animal ecology and the diet analysis methods have been
constantly improving and updating. Contrary to traditional methods of high labor intensity …
constantly improving and updating. Contrary to traditional methods of high labor intensity …
Trophic ecology of large herbivores in a reassembling African ecosystem
Megafauna assemblages have declined or disappeared throughout much of the world, and
many efforts are underway to restore them. Understanding the trophic ecology of such …
many efforts are underway to restore them. Understanding the trophic ecology of such …
[HTML][HTML] High-throughput sequencing of multiple amplicons for barcoding and integrative taxonomy
Until now, the potential of NGS for the construction of barcode libraries or integrative
taxonomy has been seldom realised. Here, we amplified (two-step PCR) and simultaneously …
taxonomy has been seldom realised. Here, we amplified (two-step PCR) and simultaneously …
Metabarcoding of shrimp stomach content: Harnessing a natural sampler for fish biodiversity monitoring
A Siegenthaler, OS Wangensteen… - Molecular Ecology …, 2019 - Wiley Online Library
Given their positioning and biological productivity, estuaries have long represented key
providers of ecosystem services and consequently remain under remarkable pressure from …
providers of ecosystem services and consequently remain under remarkable pressure from …
Testing the efficacy of DNA barcodes for identifying the vascular plants of Canada
Their relatively slow rates of molecular evolution, as well as frequent exposure to
hybridization and introgression, often make it difficult to discriminate species of vascular …
hybridization and introgression, often make it difficult to discriminate species of vascular …
Metabarcoding of fecal samples to determine herbivore diets: A case study of the endangered Pacific pocket mouse
DD Iwanowicz, AG Vandergast, RS Cornman… - PloS one, 2016 - journals.plos.org
Understanding the diet of an endangered species illuminates the animal's ecology, habitat
requirements, and conservation needs. However, direct observation of diet can be difficult …
requirements, and conservation needs. However, direct observation of diet can be difficult …
Invasions toolkit: Current methods for tracking the spread and impact of invasive species
Biological invasions exert multiple pervasive effects on ecosystems, potentially disrupting
species interactions and global ecological processes. Our ability to successfully predict and …
species interactions and global ecological processes. Our ability to successfully predict and …
Gut bacterial communities across 12 Ensifera (Orthoptera) at different feeding habits and its prediction for the insect with contrasting feeding habits
X Zheng, Q Zhu, Z Zhou, F Wu, L Chen, Q Cao, F Shi - Plos one, 2021 - journals.plos.org
Insect microbial symbioses play a critical role in insect lifecycle, and insect gut microbiome
could be influenced by many factors. Studies have shown that host diet and taxonomy have …
could be influenced by many factors. Studies have shown that host diet and taxonomy have …