Ethanolamine utilization in bacteria

KG Kaval, DA Garsin - MBio, 2018 - Am Soc Microbiol
Ethanolamine (EA) is a valuable source of carbon and/or nitrogen for bacteria capable of its
catabolism. Because it is derived from the membrane phospholipid …

Riboswitch regulation mechanisms: RNA, metabolites and regulatory proteins

ASV Bédard, EDM Hien, DA Lafontaine - Biochimica et Biophysica Acta …, 2020 - Elsevier
Riboswitches are RNA sensors that have been shown to modulate the expression of
downstream genes by altering their structure upon metabolite binding. Riboswitches are …

Obstacles and opportunities in the functional analysis of extracellular vesicle RNA–an ISEV position paper

B Mateescu, EJK Kowal, BWM Van Balkom… - Journal of …, 2017 - Taylor & Francis
The release of RNA-containing extracellular vesicles (EV) into the extracellular milieu has
been demonstrated in a multitude of different in vitro cell systems and in a variety of body …

RNA sequencing unveils very small RNAs with potential regulatory functions in bacteria

I Diallo, J Ho, D Lalaouna, E Massé… - Frontiers in Molecular …, 2022 - frontiersin.org
RNA sequencing (RNA-seq) is the gold standard for the discovery of small non-coding
RNAs. Following a long-standing approach, reads shorter than 16 nucleotides (nt) are …

Recent advances in genetic engineering tools based on synthetic biology

J Ren, J Lee, D Na - Journal of Microbiology, 2020 - Springer
Genome-scale engineering is a crucial methodology to rationally regulate microbiological
system operations, leading to expected biological behaviors or enhanced bioproduct yields …

Transcription attenuation-derived small RNA rnTrpL regulates tryptophan biosynthesis gene expression in trans

H Melior, S Li, R Madhugiri, M Stötzel… - Nucleic acids …, 2019 - academic.oup.com
Ribosome-mediated transcription attenuation is a basic posttranscriptional regulation
mechanism in bacteria. Liberated attenuator RNAs arising in this process are generally …

Discovery of new RNA classes and global RNA-binding proteins

A Smirnov, C Schneider, J Hör, J Vogel - Current opinion in microbiology, 2017 - Elsevier
The identification of new RNA functions and the functional annotation of transcripts in
genomes represent exciting yet challenging endeavours of modern biology. Crucial insights …

Identification of Small RNAs During High Light Acclimation in Arabidopsis thaliana

B Tiwari, K Habermann, MA Arif, O Top… - Frontiers in Plant …, 2021 - frontiersin.org
The biological significance of non-coding RNAs (ncRNAs) has been firmly established to be
important for the regulation of genes involved in stress acclimation. Light plays an important …

The Mitochondrial Genome of a Freshwater Pelagic Amphipod Macrohectopus branickii Is among the Longest in Metazoa

EV Romanova, YS Bukin, KV Mikhailov… - Genes, 2021 - mdpi.com
There are more than 350 species of amphipods (Crustacea) in Lake Baikal, which have
emerged predominantly through the course of endemic radiation. This group represents a …

Non-coding RNAs: what are we missing?

C Carvalho Barbosa, SH Calhoun… - Biochemistry and Cell …, 2020 - cdnsciencepub.com
Over the past two decades, the importance of small non-coding RNAs (sncRNAs) as
regulatory molecules has become apparent in all three domains of life (archaea, bacteria …