Fungal identification using molecular tools: a primer for the natural products research community
Fungi are morphologically, ecologically, metabolically, and phylogenetically diverse. They
are known to produce numerous bioactive molecules, which makes them very useful for …
are known to produce numerous bioactive molecules, which makes them very useful for …
The genomes of three uneven siblings: footprints of the lifestyles of three Trichoderma species
M Schmoll, C Dattenböck… - Microbiology and …, 2016 - Am Soc Microbiol
The genus Trichoderma contains fungi with high relevance for humans, with applications in
enzyme production for plant cell wall degradation and use in biocontrol. Here, we provide a …
enzyme production for plant cell wall degradation and use in biocontrol. Here, we provide a …
[HTML][HTML] Protective effects of different Bacteroides vulgatus strains against lipopolysaccharide-induced acute intestinal injury, and their underlying functional genes
Abstract Introduction The roles of Bacteroides species in alleviating inflammation and
intestinal injury has been widely demonstrated, but few studies have focused on the roles of …
intestinal injury has been widely demonstrated, but few studies have focused on the roles of …
Chromosomal-level assembly of yellow catfish genome using third-generation DNA sequencing and Hi-C analysis
G Gong, C Dan, S Xiao, W Guo, P Huang, Y Xiong… - …, 2018 - academic.oup.com
Abstract Background The yellow catfish, Pelteobagrus fulvidraco, belonging to the
Siluriformes order, is an economically important freshwater aquaculture fish species in Asia …
Siluriformes order, is an economically important freshwater aquaculture fish species in Asia …
High variability of mitochondrial gene order among fungi
From their origin as an early alpha proteobacterial endosymbiont to their current state as
cellular organelles, large-scale genomic reorganization has taken place in the mitochondria …
cellular organelles, large-scale genomic reorganization has taken place in the mitochondria …
[HTML][HTML] The Chinese mitten crab genome provides insights into adaptive plasticity and developmental regulation
The infraorder Brachyura (true or short-tailed crabs) represents a successful group of marine
invertebrates yet with limited genomic resources. Here we report a chromosome-anchored …
invertebrates yet with limited genomic resources. Here we report a chromosome-anchored …
[HTML][HTML] Extensive genomic rearrangements mediated by repetitive sequences in plastomes of Medicago and its relatives
S Wu, J Chen, Y Li, A Liu, A Li, M Yin, N Shrestha… - BMC Plant …, 2021 - Springer
Background Although plastomes are highly conserved with respect to gene content and
order in most photosynthetic angiosperms, extensive genomic rearrangements have been …
order in most photosynthetic angiosperms, extensive genomic rearrangements have been …
[HTML][HTML] EggLib: processing, analysis and simulation tools for population genetics and genomics
S De Mita, M Siol - BMC genetics, 2012 - Springer
Background With the considerable growth of available nucleotide sequence data over the
last decade, integrated and flexible analytical tools have become a necessity. In particular …
last decade, integrated and flexible analytical tools have become a necessity. In particular …
[HTML][HTML] Population genomic analysis and de novo assembly reveal the origin of weedy rice as an evolutionary game
J Sun, D Ma, L Tang, M Zhao, G Zhang, W Wang… - Molecular plant, 2019 - cell.com
Crop weediness, especially that of weedy rice (Oryza sativa f. spontanea), remains
mysterious. Weedy rice possesses robust ecological adaptability; however, how this strain …
mysterious. Weedy rice possesses robust ecological adaptability; however, how this strain …
[HTML][HTML] Phylogenetic analysis of SARS-CoV-2 in the Boston area highlights the role of recurrent importation and superspreading events.
JE Lemieux, KJ Siddle, BM Shaw, C Loreth… - MedRxiv, 2020 - ncbi.nlm.nih.gov
SARS-CoV-2 has caused a severe, ongoing outbreak of COVID-19 in Massachusetts with
111,070 confirmed cases and 8,433 deaths as of August 1, 2020. To investigate the …
111,070 confirmed cases and 8,433 deaths as of August 1, 2020. To investigate the …