A tug-of-war between severe acute respiratory syndrome coronavirus 2 and host antiviral defence: lessons from other pathogenic viruses

SY Fung, KS Yuen, ZW Ye, CP Chan… - Emerging microbes & …, 2020 - Taylor & Francis
ABSTRACT World Health Organization has declared the ongoing outbreak of coronavirus
disease 2019 (COVID-19) a Public Health Emergency of International Concern. The virus …

How HIV Nef proteins hijack membrane traffic to promote infection

CZ Buffalo, Y Iwamoto, JH Hurley, X Ren - Journal of virology, 2019 - Am Soc Microbiol
The accessory protein Nef of human immunodeficiency virus (HIV) is a primary determinant
of viral pathogenesis. Nef is abundantly expressed during infection and reroutes a variety of …

[HTML][HTML] Structural basis of CD4 downregulation by HIV-1 Nef

Y Kwon, RM Kaake, I Echeverria, M Suarez… - Nature structural & …, 2020 - nature.com
The HIV-1 Nef protein suppresses multiple immune surveillance mechanisms to promote
viral pathogenesis and is an attractive target for the development of novel therapeutics. A …

Clathrin's life beyond 40: Connecting biochemistry with physiology and disease

K Briant, L Redlingshöfer, FM Brodsky - Current Opinion in Cell Biology, 2020 - Elsevier
Understanding of the range and mechanisms of clathrin functions has developed
exponentially since clathrin's discovery in 1975. Here, newly established molecular …

[HTML][HTML] Retroviral restriction factors and their viral targets: restriction strategies and evolutionary adaptations

G Boso, CA Kozak - Microorganisms, 2020 - mdpi.com
The evolutionary conflict between retroviruses and their vertebrate hosts over millions of
years has led to the emergence of cellular innate immune proteins termed restriction factors …

[HTML][HTML] Nef homodimers down-regulate SERINC5 by AP-2–mediated endocytosis to promote HIV-1 infectivity

RP Staudt, TE Smithgall - Journal of Biological Chemistry, 2020 - ASBMB
SERINC5 is a multipass intrinsic membrane protein that suppresses HIV-1 infectivity when
incorporated into budding virions. The HIV-1 Nef virulence factor prevents viral incorporation …

[HTML][HTML] Evolutionary conflicts and adverse effects of antiviral factors

D Sauter, F Kirchhoff - Elife, 2021 - elifesciences.org
Human cells are equipped with a plethora of antiviral proteins protecting them against
invading viral pathogens. In contrast to apoptotic or pyroptotic cell death, which serves as …

Phylogenetic reconstruction and functional characterization of the ancestral Nef protein of primate lentiviruses

AS Olabode, MJ Mumby, TA Wild… - Molecular Biology …, 2023 - academic.oup.com
Nef is an accessory protein unique to the primate HIV-1, HIV-2, and SIV lentiviruses. During
infection, Nef functions by interacting with multiple host proteins within infected cells to …

Complementarity of hydrogen/deuterium exchange mass spectrometry and cryo-electron microscopy

JR Engen, EA Komives - Trends in biochemical sciences, 2020 - cell.com
Methodological improvements in both single particle cryo-electron microscopy (cryo-EM)
and hydrogen/deuterium exchange mass spectrometry (HDX-MS) mean that the two …

An amino acid polymorphism within the HIV-1 Nef dileucine motif functionally uncouples cell surface CD4 and SERINC5 downregulation

MJ Mumby, AL Johnson, SM Trothen… - Journal of …, 2021 - Am Soc Microbiol
ABSTRACT Serine incorporator 5 (SERINC5) reduces the infectivity of progeny HIV-1 virions
by incorporating into the outer host-derived viral membrane during egress. To counter …