Fundamentals and recent developments in approximate Bayesian computation

J Lintusaari, MU Gutmann, R Dutta, S Kaski… - Systematic …, 2017 - academic.oup.com
Bayesian inference plays an important role in phylogenetics, evolutionary biology, and in
many other branches of science. It provides a principled framework for dealing with …

Simulation and inference algorithms for stochastic biochemical reaction networks: from basic concepts to state-of-the-art

DJ Warne, RE Baker… - Journal of the Royal …, 2019 - royalsocietypublishing.org
Stochasticity is a key characteristic of intracellular processes such as gene regulation and
chemical signalling. Therefore, characterizing stochastic effects in biochemical systems is …

[图书][B] Handbook of approximate Bayesian computation

SA Sisson, Y Fan, M Beaumont - 2018 - books.google.com
As the world becomes increasingly complex, so do the statistical models required to analyse
the challenging problems ahead. For the very first time in a single volume, the Handbook of …

Bayesian computation: a summary of the current state, and samples backwards and forwards

PJ Green, K Łatuszyński, M Pereyra, CP Robert - Statistics and Computing, 2015 - Springer
Recent decades have seen enormous improvements in computational inference for
statistical models; there have been competitive continual enhancements in a wide range of …

Bayesian estimation of agent-based models

J Grazzini, MG Richiardi, M Tsionas - Journal of Economic Dynamics and …, 2017 - Elsevier
We consider Bayesian inference techniques for agent-based (AB) models, as an alternative
to simulated minimum distance (SMD). Three computationally heavy steps are involved:(i) …

A tutorial introduction to Bayesian inference for stochastic epidemic models using Approximate Bayesian Computation

T Kypraios, P Neal, D Prangle - Mathematical biosciences, 2017 - Elsevier
Likelihood-based inference for disease outbreak data can be very challenging due to the
inherent dependence of the data and the fact that they are usually incomplete. In this paper …

Approximate Bayesian computation for forward modeling in cosmology

J Akeret, A Refregier, A Amara… - Journal of Cosmology …, 2015 - iopscience.iop.org
Bayesian inference is often used in cosmology and astrophysics to derive constraints on
model parameters from observations. This approach relies on the ability to compute the …

Summary statistics

D Prangle - Handbook of approximate Bayesian computation, 2018 - taylorfrancis.com
This chapter adds coverage of recent developments, particularly on auxiliary likelihood
methods and ABC model choice. It focuses on summary statistic selection methods which …

Adaptive Gaussian process approximation for Bayesian inference with expensive likelihood functions

H Wang, J Li - Neural computation, 2018 - direct.mit.edu
We consider Bayesian inference problems with computationally intensive likelihood
functions. We propose a Gaussian process (GP)–based method to approximate the joint …

Uncertainty management in multidisciplinary design of critical safety systems

E Patelli, DA Alvarez, M Broggi, M Angelis - Journal of Aerospace …, 2015 - arc.aiaa.org
Managing the uncertainty in multidisciplinary design of safety-critical systems requires not
only the availability of a single approach or methodology to deal with uncertainty but a set of …