Options available—from start to finish—for obtaining data from DNA microarrays II

AJ Holloway, RK Van Laar, RW Tothill, DDL Bowtell - Nature genetics, 2002 - nature.com
Microarray technology has undergone a rapid evolution. With widespread interest in large-
scale genomic research, an abundance of equipment and reagents have now become …

[HTML][HTML] Internet-delivered cognitive behavioral therapy for anxiety disorders in open community versus clinical service recruitment: meta-analysis

G Romijn, N Batelaan, R Kok, J Koning… - Journal of medical …, 2019 - jmir.org
Background Ample studies have shown the effectiveness of internet-delivered cognitive
behavioral therapy (iCBT) for anxiety disorders. These studies recruited their participants …

Normalization and missing value imputation for label-free LC-MS analysis

YV Karpievitch, AR Dabney, RD Smith - BMC bioinformatics, 2012 - Springer
Shotgun proteomic data are affected by a variety of known and unknown systematic biases
as well as high proportions of missing values. Typically, normalization is performed in an …

Normalization approaches for removing systematic biases associated with mass spectrometry and label-free proteomics

SJ Callister, RC Barry, JN Adkins… - Journal of proteome …, 2006 - ACS Publications
Central tendency, linear regression, locally weighted regression, and quantile techniques
were investigated for normalization of peptide abundance measurements obtained from …

Modern fertility awareness methods: wrist wearables capture the changes in temperature associated with the menstrual cycle

M Shilaih, BM Goodale, L Falco, F Kübler… - Bioscience …, 2018 - portlandpress.com
Core and peripheral body temperatures are affected by changes in reproductive hormones
during the menstrual cycle. Women worldwide use the basal body temperature (BBT) …

Whole-genome microarrays of fission yeast: characteristics, accuracy, reproducibility, and processing of array data

R Lyne, G Burns, J Mata, CJ Penkett, G Rustici, D Chen… - BMC genomics, 2003 - Springer
Background The genome of the fission yeast Schizosaccharomyces pombe has recently
been sequenced, setting the stage for the post-genomic era of this increasingly popular …

[HTML][HTML] Intrauterine growth restriction modifies the developmental pattern of intestinal structure, transcriptomic profile, and bacterial colonization in neonatal pigs

R D'Inca, M Kloareg, C Gras-Le Guen… - The Journal of …, 2010 - Elsevier
Neonates with intrauterine growth restriction (IUGR) are prone to suffer from digestive
diseases. Using neonatal pigs with IUGR, we tested the hypothesis that IUGR may induce …

[HTML][HTML] Wearable sensors reveal menses-driven changes in physiology and enable prediction of the fertile window: observational study

BM Goodale, M Shilaih, L Falco, F Dammeier… - Journal of medical …, 2019 - jmir.org
Background: Previous research examining physiological changes across the menstrual
cycle has considered biological responses to shifting hormones in isolation. Clinical studies …

Non-linear normalization and background correction in one-channel cDNA microarray studies

D Edwards - Bioinformatics, 2003 - academic.oup.com
Motivation: Data from one-channel cDNA microarray studies may exhibit poor reproducibility
due to spatial heterogeneity, non-linear array-to-array variation and problems in correcting …

Molecular profiling of diabetic mouse kidney reveals novel genes linked to glomerular disease

K Susztak, E Bottinger, A Novetsky, D Liang, Y Zhu… - Diabetes, 2004 - Am Diabetes Assoc
To describe gene expression changes that characterize the development of diabetic
nephropathy, we performed microarray and phenotype analysis on kidneys from db/db mice …