The next generation of microbial ecology and its importance in environmental sustainability

M Lemke, R DeSalle - Microbial ecology, 2023 - Springer
Collectively, we have been reviewers for microbial ecology, genetics and genomics studies
that include environmental DNA (eDNA), microbiome studies, and whole bacterial genome …

[HTML][HTML] Using New Technologies to Analyze Gut Microbiota and Predict Cancer Risk

MA Hemmati, M Monemi, S Asli, S Mohammadi… - Cells, 2024 - mdpi.com
The gut microbiota significantly impacts human health, influencing metabolism,
immunological responses, and disease prevention. Dysbiosis, or microbial imbalance, is …

FrogCap: A modular sequence capture probe‐set for phylogenomics and population genetics for all frogs, assessed across multiple phylogenetic scales

CR Hutter, KA Cobb, DM Portik… - Molecular Ecology …, 2022 - Wiley Online Library
Despite the prevalence of high‐throughput sequencing in phylogenetics, many relationships
remain difficult to resolve because of conflicting signal among genomic regions. Selection of …

Dissipation kinetics of chlorpyrifos and 3, 5, 6 trichloro-2-pyridinol under vegetation of different aromatic grasses: Linkage with enzyme kinetics and microbial …

R Yadav, P Khare - Journal of Hazardous Materials, 2023 - Elsevier
The dissipation of chlorpyrifos (CP) and its hydrolytic metabolite 3, 5, 6-trichloro-2-pyridinol
(TCP) in the soil is crucial for safe agriculture. However, there is still lacking relevant …

VenomCap: An exon‐capture probe set for the targeted sequencing of snake venom genes

SL Travers, CR Hutter, CC Austin… - Molecular Ecology …, 2024 - Wiley Online Library
Snake venoms are complex mixtures of toxic proteins that hold significant medical,
pharmacological and evolutionary interest. To better understand the genetic diversity …

Molecular assessment of dietary variation in neighbouring primate groups

J Schneider, L Brun, P Taberlet… - Methods in Ecology …, 2023 - Wiley Online Library
Facing rapid environmental changes and anthropogenic habitat destruction, animal
behavioural plasticity becomes an adaptive potential that needs to be considered in …

Enriching the future of public health microbiology with hybridization bait capture

MS Beaudry, MIU Bhuiyan… - Clinical Microbiology …, 2024 - journals.asm.org
Public health microbiology focuses on microorganisms and infectious agents that impact
human health. For years, this field has relied on culture or molecular methods to investigate …

Land-use change and management intensification is associated with shifts in composition of soil microbial communities and their functional diversity in coffee …

K Carrasco-Espinosa, M Avitia, A Barrón-Sandoval… - Microorganisms, 2022 - mdpi.com
Despite the central role of microorganisms in soil fertility, little understanding exists
regarding the impact of management practices and soil microbial diversity on soil processes …

Changes in physicochemical properties and bacterial communities of tropical soil in China under different soil utilization types

C He, K Li, C Wen, J Li, P Fan, Y Ruan, L Meng, Z Jia - Agronomy, 2023 - mdpi.com
The primary purpose of our study is to clarify the differences in physicochemical properties
and microbial community composition with the continuous evolution of soil utilization types …

The clinical utility of Nanopore 16S rRNA gene sequencing for direct bacterial identification in normally sterile body fluids

HY Lao, LLY Wong, Y Hui, TTL Ng, CTM Chan… - Frontiers in …, 2024 - frontiersin.org
The prolonged incubation period of traditional culture methods leads to a delay in
diagnosing invasive infections. Nanopore 16S rRNA gene sequencing (Nanopore 16S) …