Next-generation phenotyping: requirements and strategies for enhancing our understanding of genotype–phenotype relationships and its relevance to crop …

JN Cobb, G DeClerck, A Greenberg, R Clark… - Theoretical and Applied …, 2013 - Springer
More accurate and precise phenotyping strategies are necessary to empower high-
resolution linkage mapping and genome-wide association studies and for training genomic …

Incomplete dominance of deleterious alleles contributes substantially to trait variation and heterosis in maize

J Yang, S Mezmouk, A Baumgarten, ES Buckler… - PLoS …, 2017 - journals.plos.org
Deleterious alleles have long been proposed to play an important role in patterning
phenotypic variation and are central to commonly held ideas explaining the hybrid vigor …

Global Diversity Lines–A Five-Continent Reference Panel of Sequenced Drosophila melanogaster Strains

JK Grenier, JR Arguello, MC Moreira… - G3: Genes …, 2015 - academic.oup.com
Reference collections of multiple Drosophila lines with accumulating collections of “omics”
data have proven especially valuable for the study of population genetics and complex trait …

The Toll pathway underlies host sexual dimorphism in resistance to both Gram-negative and Gram-positive bacteria in mated Drosophila

DF Duneau, HC Kondolf, JH Im, GA Ortiz, C Chow… - BMC biology, 2017 - Springer
Background Host sexual dimorphism is being increasingly recognized to generate strong
differences in the outcome of infectious disease, but the mechanisms underlying …

Evidence for the fixation of gene duplications by positive selection in Drosophila

M Cardoso-Moreira, JR Arguello, S Gottipati… - Genome …, 2016 - genome.cshlp.org
Gene duplications play a key role in the emergence of novel traits and in adaptation. But
despite their centrality to evolutionary processes, it is still largely unknown how new gene …

Diallel analysis for morphological and biochemical traits in tomato cultivated under the influence of tomato leaf curl virus

P Kaushik, MS Dhaliwal - Agronomy, 2018 - mdpi.com
Eloquent information about the genetic basis of inheritance is important for any breeding
program. Therefore, a diallel study was conducted under the influence of tomato leaf curl …

Extensive local adaptation within the chemosensory system following Drosophila melanogaster's global expansion

JR Arguello, M Cardoso-Moreira, JK Grenier… - Nature …, 2016 - nature.com
How organisms adapt to new environments is of fundamental biological interest, but poorly
understood at the genetic level. Chemosensory systems provide attractive models to …

Creating outbred and inbred populations in haplodiploids to measure adaptive responses in the laboratory

DP Godinho, MA Cruz… - Ecology and …, 2020 - Wiley Online Library
Laboratory studies are often criticized for not being representative of processes occurring in
natural populations. One reason for this is the fact that laboratory populations generally do …

Monophyly of Wolbachia pipientis genomes within Drosophila melanogaster: geographic structuring, titre variation and host effects across five populations

AM Early, AG Clark - Molecular ecology, 2013 - Wiley Online Library
Wolbachia pipientis is one of the most widely studied endosymbionts today, yet we know
little about its short‐term adaptation and evolution. Here, using a set of 91 inbred Drosophila …

Sexual dimorphism in Drosophila melanogaster survival of Beauveria bassiana infection depends on core immune signaling

P Shahrestani, M Chambers, J Vandenberg, K Garcia… - Scientific reports, 2018 - nature.com
In many animal species, females and males differ in physiology, lifespan, and immune
function. The magnitude and direction of the sexual dimorphism in immune function varies …