Applications of environmental DNA (eDNA) in ecology and conservation: opportunities, challenges and prospects

KC Beng, RT Corlett - Biodiversity and conservation, 2020 - Springer
Conserving biodiversity in the face of ever-increasing human pressure is hampered by our
lack of basic information on species occurrence, distribution, abundance, habitat …

A microbial sea of possibilities: current knowledge and prospects for an improved understanding of the fish microbiome

TPRA Legrand, JW Wynne, LS Weyrich… - Reviews in …, 2020 - Wiley Online Library
The mucosal surfaces of fish represent an important barrier that supports and regulates a
diverse array of microbial assemblages and contributes to the overall health and fitness of …

Environmental DNA/RNA for pathogen and parasite detection, surveillance, and ecology

D Bass, KW Christison, GD Stentiford, LSJ Cook… - Trends in …, 2023 - cell.com
Detection of pathogens, parasites, and other symbionts in environmental samples via
eDNA/eRNA (collectively eNA) is an increasingly important source of information about their …

Dissecting the factors shaping fish skin microbiomes in a heterogeneous inland water system

Y Krotman, TM Yergaliyev, R Alexander Shani… - Microbiome, 2020 - Springer
Background Fish skin microbiomes are rarely studied in inland water systems, in spite of
their importance for fish health and ecology. This is mainly because fish species distribution …

Signatures of dysbiosis in fish microbiomes in the context of aquaculture

R Xavier, R Severino, SM Silva - Reviews in Aquaculture, 2024 - Wiley Online Library
Fish microbiome plays an important role in maintaining host homeostasis, with many
bacterial functions directly linked to host fitness. Fish microbiome research is advancing fast …

The promise and pitfalls of environmental DNA and RNA approaches for the monitoring of human and animal pathogens from aquatic sources

JA Farrell, L Whitmore, DJ Duffy - Bioscience, 2021 - academic.oup.com
Novel forensics-inspired molecular approaches have revolutionized species detection in the
wild and are particularly useful for tracing endangered or invasive species. These new …

From the basics to emerging diagnostic technologies: What is on the horizon for tilapia disease diagnostics?

HT Dong, T Chaijarasphong, AC Barnes… - Reviews in …, 2023 - Wiley Online Library
Tilapia is an affordable protein source farmed in over 140 countries with the majority of
production in low‐and middle‐income countries. Intensification of tilapia farming has …

Optimization of low-biomass sample collection and quantitative PCR-based titration impact 16S rRNA microbiome resolution

BGJ Clokie, A Elsheshtawy, A Albalat… - Microbiology …, 2022 - Am Soc Microbiol
The major aquatic interface between host and environment in teleost finfish species is the
gill. The diversity of this infraclass, high complexity of the organ, and its direct exposure to …

Scale Drop Disease Virus (SDDV) and Lates calcarifer Herpes Virus (LCHV) Coinfection Downregulate Immune-Relevant Pathways and Cause Splenic and Kidney …

JA Domingos, X Shen, C Terence, S Senapin… - Frontiers in …, 2021 - frontiersin.org
Marine farming of barramundi (Lates calcarifer) in Southeast Asia is currently severely
affected by viral diseases. To better understand the biological implications and gene …

Multigenerational effects of elevated temperature on host-microbiota interactions in the marine water flea Diaphanosoma celebensis exposed to micro-and …

MS Kim, YH Lee, Y Lee, H Jeong, M Wang… - Journal of Hazardous …, 2024 - Elsevier
Rising ocean temperatures are driving unprecedented changes in global marine
ecosystems. Meanwhile, there is growing concern about microplastic and nanoplastic (MNP) …