The origin of new genes: glimpses from the young and old

M Long, E Betrán, K Thornton, W Wang - Nature Reviews Genetics, 2003 - nature.com
Genome data have revealed great variation in the numbers of genes in different organisms,
which indicates that there is a fundamental process of genome evolution: the origin of new …

The repair of double-strand breaks in plants: mechanisms and consequences for genome evolution

H Puchta - Journal of experimental botany, 2005 - academic.oup.com
The efficient repair of double-strand breaks (DSBs) in genomic DNA is important for the
survival of all organisms. In recent years, basic mechanisms of DSB repair in somatic plant …

Dynamics of genome size evolution in birds and mammals

A Kapusta, A Suh, C Feschotte - Proceedings of the …, 2017 - National Acad Sciences
Genome size in mammals and birds shows remarkably little interspecific variation compared
with other taxa. However, genome sequencing has revealed that many mammal and bird …

Age of fracture

D Rodgers - Historically Speaking, 2011 - muse.jhu.edu
The key event in the era's welter of competing arguments was less the politicization of
argument than the breakup into fragments of the block ideas that had dominated American …

Initial sequencing and analysis of the human genome

US DOE Joint Genome Institute: Hawkins Trevor 4 … - Nature, 2001 - nature.com
The human genome holds an extraordinary trove of information about human development,
physiology, medicine and evolution. Here we report the results of an international …

The Arabidopsis lyrata genome sequence and the basis of rapid genome size change

TT Hu, P Pattyn, EG Bakker, J Cao, JF Cheng… - Nature …, 2011 - nature.com
We report the 207-Mb genome sequence of the North American Arabidopsis lyrata strain
MN47 based on 8.3× dideoxy sequence coverage. We predict 32,670 genes in this …

Immunity-Related Genes and Gene Families in Anopheles gambiae

GK Christophides, E Zdobnov, C Barillas-Mury… - Science, 2002 - science.org
We have identified 242 Anopheles gambiae genes from 18 gene families implicated in
innate immunity and have detected marked diversification relative to Drosophila …

Mechanisms of recent genome size variation in flowering plants

JL Bennetzen, J Ma, KM Devos - Annals of botany, 2005 - academic.oup.com
Background and Aims Plant nuclear genomes vary tremendously in DNA content, mostly
due to differences in ancestral ploidy and variation in the degree of transposon amplification …

Estimation of the Spontaneous Mutation Rate per Nucleotide Site in a Drosophila melanogaster Full-Sib Family

PD Keightley, RW Ness, DL Halligan, PR Haddrill - Genetics, 2014 - academic.oup.com
We employed deep genome sequencing of two parents and 12 of their offspring to estimate
the mutation rate per site per generation in a full-sib family of Drosophila melanogaster …

Doubling genome size without polyploidization: dynamics of retrotransposition-driven genomic expansions in Oryza australiensis, a wild relative of rice

B Piegu, R Guyot, N Picault, A Roulin… - Genome …, 2006 - genome.cshlp.org
Retrotransposons are the main components of eukaryotic genomes, representing up to 80%
of some large plant genomes. These mobile elements transpose via a “copy and paste” …