Oxymoron no more: the expanding world of heterochromatic genes

JC Yasuhara, BT Wakimoto - TRENDS in Genetics, 2006 - cell.com
Heterochromatin has been oversimplified and even misunderstood. In particular, the
existence of heterochromatic genes is often overlooked. Diverse types of genes reside …

A new portrait of constitutive heterochromatin: lessons from Drosophila melanogaster

RM Marsano, E Giordano, G Messina, P Dimitri - Trends in Genetics, 2019 - cell.com
Constitutive heterochromatin represents a significant portion of eukaryotic genomes, but its
functions still need to be elucidated. Even in the most updated genetics and molecular …

Ty-3, a begomovirus resistance locus near the Tomato yellow leaf curl virus resistance locus Ty-1 on chromosome 6 of tomato

Y Ji, DJ Schuster, JW Scott - Molecular Breeding, 2007 - Springer
Resistance to begomoviruses including bipartite Tomato mottle virus (ToMoV) and
monopartite Tomato yellow leaf curl virus (TYLCV) has been introgressed to cultivated …

Identification of miniature inverted-repeat transposable elements (MITEs) and biogenesis of their siRNAs in the Solanaceae: new functional implications for MITEs

H Kuang, C Padmanabhan, F Li, A Kamei… - Genome …, 2009 - genome.cshlp.org
Small RNAs regulate the genome by guiding transcriptional and post-transcriptional
silencing machinery to specific target sequences, including genes and transposable …

Analysis of the Petunia TM6 MADS Box Gene Reveals Functional Divergence within the DEF/AP3 Lineage

AS Rijpkema, S Royaert, J Zethof… - The Plant …, 2006 - academic.oup.com
Antirrhinum majus DEFICIENS (DEF) and Arabidopsis thaliana APETALA3 (AP3) MADS box
proteins are required to specify petal and stamen identity. Sampling of DEF/AP3 homologs …

Endogenous pararetroviral sequences in tomato (Solanum lycopersicum) and related species

C Staginnus, W Gregor, MF Mette, CH Teo… - BMC Plant …, 2007 - Springer
Abstract Background Endogenous pararetroviral sequences (EPRVs) are a recently
discovered class of repetitive sequences that is broadly distributed in the plant kingdom. The …

Genomic analysis of wild tomato introgressions determining metabolism-and yield-associated traits

L Kamenetzky, R Asís, S Bassi, F de Godoy… - Plant …, 2010 - academic.oup.com
With the aim of determining the genetic basis of metabolic regulation in tomato fruit, we
constructed a detailed physical map of genomic regions spanning previously described …

Polymorphism of a new Ty1-copia retrotransposon in durum wheat under salt and light stresses

P Woodrow, G Pontecorvo, S Fantaccione… - Theoretical and Applied …, 2010 - Springer
Long terminal repeat retrotransposons are the most abundant mobile elements in the plant
genome and play an important role in the genome reorganization induced by environmental …

Uneven distribution of expressed sequence tag loci on maize pachytene chromosomes

LK Anderson, A Lai, SM Stack, C Rizzon… - Genome …, 2006 - genome.cshlp.org
Examining the relationships among DNA sequence, meiotic recombination, and
chromosome structure at a genome-wide scale has been difficult because only a few …

The distribution of copia‐type retrotransposons and the evolutionary history of tomato and related wild species

SM Tam, M Causse, C Garchery, H Burck… - Journal of …, 2007 - academic.oup.com
Retrotransposons are mobile genetic elements that amplify throughout the genome and may
be important contributors of genetic diversity. Their distribution is influenced by element …