High-resolution native mass spectrometry

S Tamara, MA den Boer, AJR Heck - Chemical Reviews, 2021 - ACS Publications
Native mass spectrometry (MS) involves the analysis and characterization of
macromolecules, predominantly intact proteins and protein complexes, whereby as much as …

Protein assembly by design

J Zhu, N Avakyan, A Kakkis, AM Hoffnagle… - Chemical …, 2021 - ACS Publications
Proteins are nature's primary building blocks for the construction of sophisticated molecular
machines and dynamic materials, ranging from protein complexes such as photosystem II …

Multivalent designed proteins neutralize SARS-CoV-2 variants of concern and confer protection against infection in mice

AC Hunt, JB Case, YJ Park, L Cao, K Wu… - Science translational …, 2022 - science.org
New variants of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) continue to
arise and prolong the coronavirus disease 2019 (COVID-19) pandemic. Here, we used a …

[HTML][HTML] Recent advances in de novo protein design: Principles, methods, and applications

X Pan, T Kortemme - Journal of Biological Chemistry, 2021 - ASBMB
The computational de novo protein design is increasingly applied to address a number of
key challenges in biomedicine and biological engineering. Successes in expanding …

A brief history of de novo protein design: minimal, rational, and computational

DN Woolfson - Journal of Molecular Biology, 2021 - Elsevier
Protein design has come of age, but how will it mature? In the 1980s and the 1990s, the
primary motivation for de novo protein design was to test our understanding of the …

Accurate computational design of three-dimensional protein crystals

Z Li, S Wang, U Nattermann, AK Bera, AJ Borst… - Nature Materials, 2023 - nature.com
Protein crystallization plays a central role in structural biology. Despite this, the process of
crystallization remains poorly understood and highly empirical, with crystal contacts, lattice …

Native mass spectrometry: recent progress and remaining challenges

KR Karch, DT Snyder, SR Harvey… - Annual review of …, 2022 - annualreviews.org
Native mass spectrometry (nMS) has emerged as an important tool in studying the structure
and function of macromolecules and their complexes in the gas phase. In this review, we …

Electric field stimulates production of highly conductive microbial OmcZ nanowires

SE Yalcin, JP O'Brien, Y Gu, K Reiss, SM Yi… - Nature chemical …, 2020 - nature.com
Multifunctional living materials are attractive due to their powerful ability to self-repair and
replicate. However, most natural materials lack electronic functionality. Here we show that …

Sparks of function by de novo protein design

AE Chu, T Lu, PS Huang - Nature biotechnology, 2024 - nature.com
Abstract Information in proteins flows from sequence to structure to function, with each step
causally driven by the preceding one. Protein design is founded on inverting this process …

Bottom-up de novo design of functional proteins with complex structural features

C Yang, F Sesterhenn, J Bonet, EA van Aalen… - Nature Chemical …, 2021 - nature.com
De novo protein design has enabled the creation of new protein structures. However, the
design of functional proteins has proved challenging, in part due to the difficulty of …