New insight into phytochromes: connecting structure to function

J Hughes, A Winkler - Annual review of plant biology, 2024 - annualreviews.org
Red and far-red light–sensing phytochromes are widespread in nature, occurring in plants,
algae, fungi, and prokaryotes. Despite at least a billion years of evolution, their photosensory …

Red light optogenetics in neuroscience

K Lehtinen, MS Nokia, H Takala - Frontiers in Cellular Neuroscience, 2022 - frontiersin.org
Optogenetics, a field concentrating on controlling cellular functions by means of light-
activated proteins, has shown tremendous potential in neuroscience. It possesses superior …

Light-regulated gene expression in Bacteria: Fundamentals, advances, and perspectives

R Ohlendorf, A Möglich - Frontiers in Bioengineering and …, 2022 - frontiersin.org
Numerous photoreceptors and genetic circuits emerged over the past two decades and now
enable the light-dependent ie, optogenetic, regulation of gene expression in bacteria …

Vibrational couplings between protein and cofactor in bacterial phytochrome Agp1 revealed by 2D-IR spectroscopy

D Buhrke, N Michael, P Hamm - Proceedings of the …, 2022 - National Acad Sciences
Phytochromes are ubiquitous photoreceptor proteins that undergo a significant refolding of
secondary structure in response to initial photoisomerization of the chromophoric group …

The structure of Arabidopsis phytochrome A reveals topological and functional diversification among the plant photoreceptor isoforms

ES Burgie, H Li, ZTK Gannam, KE McLoughlin… - Nature plants, 2023 - nature.com
Plants employ a divergent cohort of phytochrome (Phy) photoreceptors to govern many
aspects of morphogenesis through reversible photointerconversion between inactive Pr and …

Engineering bacteriophytochrome-coupled photoactivated adenylyl cyclases for enhanced optogenetic camp modulation

Q Xu, A Vogt, F Frechen, C Yi, M Küçükerden… - Journal of molecular …, 2024 - Elsevier
Sensory photoreceptors abound in nature and enable organisms to adapt behavior,
development, and physiology to environmental light. In optogenetics, photoreceptors allow …

The interconnecting hairpin extension" arm": An essential allosteric element of phytochrome activity

M Kurttila, J Rumfeldt, H Takala, JA Ihalainen - Structure, 2023 - cell.com
In red-light sensing phytochromes, isomerization of the bilin chromophore triggers structural
and dynamic changes across multiple domains, ultimately leading to control of the output …

The photocycle of bacteriophytochrome is initiated by counterclockwise chromophore isomerization

D Morozov, V Modi, V Mironov… - The Journal of Physical …, 2022 - ACS Publications
Photoactivation of bacteriophytochrome involves a cis–trans photoisomerization of a
biliverdin chromophore, but neither the precise sequence of events nor the direction of the …

Signaling by a bacterial phytochrome histidine kinase involves a conformational cascade reorganizing the dimeric photoreceptor

ES Burgie, K Basore, MJ Rau, B Summers… - Nature …, 2024 - nature.com
Phytochromes (Phys) are a divergent cohort of bili-proteins that detect light through
reversible interconversion between dark-adapted Pr and photoactivated Pfr states. While our …

Leveraging the histidine kinase-phosphatase duality to sculpt two-component signaling

SSM Meier, E Multamäki, AT Ranzani, H Takala… - Nature …, 2024 - nature.com
Bacteria must constantly probe their environment for rapid adaptation, a crucial need most
frequently served by two-component systems (TCS). As one component, sensor histidine …